CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011692.1-P	Field mustard	plastid	97.32	97.0
CDX69234	Canola	cytosol, plastid	96.98	96.82
AT4G36580.1	Thale cress	plastid	87.1	82.28
CDY36475	Canola	plastid	81.07	76.83
PGSC0003DMT400040085	Potato	extracellular	44.89	75.28
CDY30315	Canola	plastid	79.73	71.9
CDY23468	Canola	cytosol	45.39	70.94
VIT_04s0023g01900.t01	Wine grape	plastid	74.37	70.81
CDY16967	Canola	cytosol	44.22	68.22
Solyc02g062700.2.1	Tomato	nucleus	73.03	68.12
KRH28685	Soybean	nucleus	71.52	67.67
KRH76781	Soybean	nucleus	70.69	67.41
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	70.02	66.45
CDY51218	Canola	plastid	79.4	66.11
Zm00001d051572_P001	Maize	mitochondrion	64.32	63.47
EES07394	Sorghum	mitochondrion	63.65	62.81
CDY43155	Canola	plastid	60.97	62.76
Os02t0706500-01	Rice	mitochondrion	64.15	62.18
TraesCS6D01G253600.1	Wheat	mitochondrion	62.81	61.48
TraesCS6A01G273800.1	Wheat	mitochondrion	62.31	61.08
Zm00001d017783_P002	Maize	mitochondrion	63.32	61.07
TraesCS6B01G300900.1	Wheat	mitochondrion	62.14	60.82
CDY29229	Canola	mitochondrion	37.35	60.76
CDY28733	Canola	plastid	63.48	60.35
CDX69409	Canola	plastid	63.32	59.06
CDY49920	Canola	plastid	62.98	58.84
CDX85480	Canola	plastid	60.3	58.06
CDY38078	Canola	plastid	59.3	56.82
HORVU6Hr1G069110.2	Barley	plastid	58.96	54.91
CDX96098	Canola	mitochondrion	21.61	54.2
CDY16968	Canola	cytosol, extracellular, plastid	13.74	34.89
CDY23469	Canola	plastid	9.55	32.95
CDX68520	Canola	cytosol	5.36	20.78
CDX94544	Canola	mitochondrion	16.92	16.58
CDY16678	Canola	cytosol	3.02	15.79
CDX83073	Canola	endoplasmic reticulum	8.88	13.95
CDY71527	Canola	mitochondrion	5.7	12.93
CDY16679	Canola	mitochondrion	3.85	11.79
CDX68521	Canola	mitochondrion	2.18	8.97

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	GO:A0A078JGN1	UniProt:A0A078JGN1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	EnsemblPlants:CDY64607	ProteinID:CDY64607	ProteinID:CDY64607.1	ncoils:Coil	InterPro:DUF3523
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	EnsemblPlantsGene:GSBRNA2T00042408001	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674
PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EE8757	SEG:seg

Description

BnaA01g34520DBnaA01g34520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGN1]

Coordinates

chrLK034495:+:22236..24953

Molecular Weight (calculated)

67466.2 Da

IEP (calculated)

9.809

GRAVY (calculated)

-0.679

Length

597 amino acids

Sequence
(BLAST)

001: MARWFPFFSS PPPSPANQSS SESKPERDEP KGSGFDPEAL ERAAKALREI NSSPHSKQVF DLMRKQEKTR LAESAADKSR NDAIQAHSDI ERQQRLAEAQ
101: RSLLQTEALT KAQTLRYEDE LARKRQQTDH EAQRHHNVEL VRMQEESSMR KERSRISTEE QIQAQRRQTE KERAELERET IRVKAMAEAE GRAHEAKLTE
201: DQNRRLLVER INGEREKWLA AINTMFGHIE GGFRTLLTDR NKLIVAVGGA TALAAGVYTT REGARVTWGY INRMLGQPSL IRESSMGRFP LAGTMSHLKN
301: RISGVAAASA AKGSKPLDNV ILHPSLKKRI EHLSRATSNT KSHQAPFRNM MFYGPPGTGK TMVAREIARK SGLDYAMMTG GDVAPLGSQA VTKIHQIFDW
401: AKTSNKGLLL FIDEADAFLC ERNSVYMSEA QRSALNALLF RTGDQSRDIV LVLATNRPGD LDSAVTDRID EVIEFPLPGE EERFKLLNLY LNNYLKKNEE
501: NRDTKPKWSH LFKKLSQKIR VEDDLTDKVI SEAARKTEGF SGREIAKLVA GVQAGVYGRK DCVLDSQLFK EIVEYKVEEH HQRIRLASES CQPLLFS

Best Arabidopsis Sequence Match ( AT4G36580.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS SRFRFPFFSS SPSPPPSDSP ANQSSSKSKA EPDEPKGSGF DPEALERAAK ALRDINSSPH SKQVFDLMRK
101: QEKTRLAELT AETSHYEAIQ AHNDIGRQQK LAEDQRNLLQ TQAQTKAQNL RYEDELARKR QQTDHEAQRH HNVELVKMQE ASSIRKEKAK IATEEQIQAQ
201: HRQTEKERAE LERETIRVKA MAEAEGRAHE AKLTEEQNRR LLMERINGER EKWLAAINTM FSHIEGGFRT LLTDRNKLIM TVGGATALAA GVYTTREGAR
301: VTWGYINRML GQPSLIRESS MRRFPWTGSV SQFKNRISGA AAASAAEGKK PLDNVILHTS LKKRIERLAR ATANTKSHQA PFRNMMFYGP PGTGKTMVAR
401: EIARKSGLDY AMMTGGDVAP LGSQAVTKIH QIFDWAKKSN KGLLLFIDEA DAFLCERNST YMSEAQRSAL NALLFRTGDQ SRDIVLVLAT NRRGDLDSAV
501: TDRIDEVIEF PLPGEEERFK LLNLYLNKYL KMGDNNEDTK PKWSHLFKKL SQKITVEEDL TDKVISEAAK KTEGFSGREI AKLVAGVQAG VYGRADCVLD
601: SQLFKEIVEY KVEEHHRRHM LASEGFQPLL FS

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4JQE9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.