CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36475	Canola	plastid	87.46	91.9
AT2G18330.1	Thale cress	plastid	84.14	87.58
Bra037225.1-P	Field mustard	plastid	95.02	87.12
CDY51218	Canola	plastid	92.9	85.77
PGSC0003DMT400040085	Potato	extracellular	43.81	81.46
CDY64607	Canola	plastid	71.9	79.73
CDX69234	Canola	cytosol, plastid	71.6	79.26
Solyc02g062700.2.1	Tomato	nucleus	73.87	76.41
VIT_04s0023g01900.t01	Wine grape	plastid	71.75	75.76
KRH76781	Soybean	nucleus	70.09	74.12
KRH28685	Soybean	nucleus	70.39	73.85
CDY23468	Canola	cytosol	40.79	70.68
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	66.77	70.27
CDY29229	Canola	mitochondrion	37.76	68.12
CDY16967	Canola	cytosol	39.73	67.96
Zm00001d051572_P001	Maize	mitochondrion	61.93	67.77
EES07394	Sorghum	mitochondrion	60.88	66.61
Os02t0706500-01	Rice	mitochondrion	60.42	64.94
Zm00001d017783_P002	Maize	mitochondrion	60.27	64.46
TraesCS6D01G253600.1	Wheat	mitochondrion	59.37	64.43
TraesCS6A01G273800.1	Wheat	mitochondrion	59.06	64.2
TraesCS6B01G300900.1	Wheat	mitochondrion	58.91	63.93
CDY43155	Canola	plastid	55.29	63.1
CDX69409	Canola	plastid	58.61	60.62
CDY28733	Canola	plastid	57.4	60.51
CDY49920	Canola	plastid	58.31	60.41
CDX96098	Canola	mitochondrion	21.6	60.08
CDX85480	Canola	plastid	54.68	58.39
CDY38078	Canola	plastid	54.38	57.78
HORVU6Hr1G069110.2	Barley	plastid	55.29	57.1
CDY16968	Canola	cytosol, extracellular, plastid	14.05	39.57
CDY23469	Canola	plastid	9.82	37.57
CDX68520	Canola	cytosol	4.68	20.13
CDY16678	Canola	cytosol	3.32	19.3
CDX94544	Canola	mitochondrion	15.41	16.75
CDX83073	Canola	endoplasmic reticulum	8.61	15.0
CDY16679	Canola	mitochondrion	4.38	14.87
CDY71527	Canola	mitochondrion	4.98	12.55
CDX68521	Canola	mitochondrion	1.96	8.97

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	GO:A0A078GUX5	UniProt:A0A078GUX5	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	EnsemblPlants:CDY30315	ProteinID:CDY30315	ProteinID:CDY30315.1	ncoils:Coil	InterPro:DUF3523
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	EnsemblPlantsGene:GSBRNA2T00044987001	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674
PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EE381D	SEG:seg

Description

BnaA09g09620DBnaA09g09620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUX5]

Coordinates

chrLK032252:-:197280..200657

Molecular Weight (calculated)

74158.5 Da

IEP (calculated)

9.513

GRAVY (calculated)

-0.727

Length

662 amino acids

Sequence
(BLAST)

001: MAASRLCSAA AIAAAFTSAS MSPNRAYADS RFRFPFFSSS SSTPSESQTD QSSPETKPET DERKGSGFDP ESLERGAKAL REINKSPHSK QVFDLMRKQE
101: KTRLAELAAD KSHNEAVQAR KDIERQQKLA EDQRNLLQQQ AQAKAQNLRY EDELARKRLQ TDHEAQRRHN VELVKMQEES STRKEQARIA TEEQIQAQQR
201: QTEKERAELE RETIRVKAMA EAEGRAHEAK LTEEQNRRML LDRINGEREK WLAAINTTFR HIEGGVKALL TDRSKLIMTV GGATALAAGV YTTREGARVT
301: WGYINRILGQ PSLIRESSMG RFPWAGSVSQ YKNKISKFGK AASAKGENPL DNVVLHPSLK KRIEHLARAT ANTKSHQAPF RNMMFYGPPG TGKTMVAREI
401: ARKSGLDYAM MTGGDVAPLG AQAVTKIHEI FDWAKKSNKG LLLFIDEADA FLCERNSTYM SEAQRSALNA LLFRTGDQSR DIVLVLATNR PGDLDSAVTD
501: RIDEVIEFPL PGEDERFKLI KLYLNKYLTG EDKKDTNTKW SHLFKKQSQK ITVEGDLTDQ VIREAAKKTE GFSGREIAKL VAGVQAAVYG RPDCVLDSQL
601: FEEIVDYKIQ EHHQRARLAT EGDQSFLYDN RRSGFGTAGT YLAEGKAGET ETVQDAKDKT AS

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.