Factsheet for Zm00001d051572_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

mitochondrion: 27297264
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07394	Sorghum	mitochondrion	93.06	93.06
Zm00001d017783_P002	Maize	mitochondrion	90.41	88.37
Os02t0706500-01	Rice	mitochondrion	75.04	73.7
PGSC0003DMT400040085	Potato	extracellular	42.98	73.03
TraesCS6A01G273800.1	Wheat	mitochondrion	72.89	72.41
TraesCS6D01G253600.1	Wheat	mitochondrion	72.89	72.3
TraesCS6B01G300900.1	Wheat	mitochondrion	72.56	71.97
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	68.76	66.14
CDY36475	Canola	plastid	68.43	65.71
VIT_04s0023g01900.t01	Wine grape	plastid	67.44	65.07
AT2G18330.1	Thale cress	plastid	67.93	64.62
CDY64607	Canola	plastid	63.47	64.32
Bra011692.1-P	Field mustard	plastid	63.64	64.27
Solyc02g062700.2.1	Tomato	nucleus	67.93	64.22
CDX69234	Canola	cytosol, plastid	63.47	64.21
AT4G36580.1	Thale cress	plastid	66.78	63.92
KRH28685	Soybean	nucleus	66.28	63.55
KRH76781	Soybean	nucleus	65.62	63.42
HORVU6Hr1G069110.2	Barley	plastid	66.94	63.18
CDY30315	Canola	plastid	67.77	61.93
Bra037225.1-P	Field mustard	plastid	67.93	56.93
CDY51218	Canola	plastid	67.27	56.76
Bra024472.1-P	Field mustard	plastid	38.68	56.25
CDY29229	Canola	mitochondrion	32.07	52.86
Zm00001d017707_P003	Maize	plastid	56.2	52.8
Zm00001d051535_P001	Maize	plastid	56.03	51.83
PGSC0003DMT400008178	Potato	cytosol, mitochondrion, peroxisome	9.59	50.43
CDX96098	Canola	mitochondrion	16.86	42.86
Bra028131.1-P	Field mustard	nucleus	18.18	37.93
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	14.88	32.37
Zm00001d007450_P001	Maize	cytosol	2.48	18.52
Zm00001d017988_P002	Maize	mitochondrion	13.88	13.95

Protein Annotations

EntrezGene:103653966	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	ProteinID:AQK54585.1	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	UniProt:K7U3H3	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI000221693B	EnsemblPlantsGene:Zm00001d051572	EnsemblPlants:Zm00001d051572_P001	EnsemblPlants:Zm00001d051572_T001	SEG:seg

Description

AAA-type ATPase family protein

Coordinates

chr4:+:163135617..163140434

Molecular Weight (calculated)

68011.8 Da

IEP (calculated)

9.746

GRAVY (calculated)

-0.511

Length

605 amino acids

Sequence
(BLAST)

001: MLRRLRLRLP GRAASAAAGA AAAMASLTNV AYADGLFRRQ SAPSNPGDED NLGASAFGRD PETLERMARA LREINNSPLA KQVFELMRKQ EETRLTELEV
101: EKVQYAIYEK LRDIERMQKK AEDYRNSLQQ EAQAKAQALR FEDELARKRM QTDHAAQRRQ DAELVKMQEA SALRREEARR ATEQKILEEM IRTEKEKAEI
201: DQETNRVKAI AEAEARVHED KQSEEVVKRM LLERMKGEKE KWLTAINTTF SHIEGGFKAL LTDRSKLMMG IGGVTALAAG VYTTREGARV TWSYINRILG
301: QPSLIRESSM SKFPLPMSRL LKPSSASLSE GAGFEKVILH PSLKRRIEHL ARATANTKSH GAPFRNMLFY GPPGTGKTLV AREMARKSGL DYAMMTGGDV
401: APLGSEAVTK IHQIFDWAKK SKKGMLVFID EADAFLCERN STHMSEAQRS ALNALLFRTG DQSRDIVLVL ATNRPGDLDA AITDRIDEVI EFPLPGEEER
501: FQLLKLYLNQ YILKEEGKGS SWSALFKKQQ RKIQVNGISD DLLREAARKI DGFSGREIAK LVASVQAAVY GRPDCILDPQ LFSEVVDYKV TEHHQRIKLA
601: SEGMV

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.