Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011692.1-P | Field mustard | plastid | 83.23 | 87.81 |
| CDY64607 | Canola | plastid | 82.28 | 87.1 |
| CDX69234 | Canola | cytosol, plastid | 82.28 | 86.96 |
| AT2G18330.1 | Thale cress | plastid | 84.02 | 83.49 |
| PGSC0003DMT400040085 | Potato | extracellular | 43.83 | 77.81 |
| VIT_04s0023g01900.t01 | Wine grape | plastid | 74.68 | 75.28 |
| KRH28685 | Soybean | nucleus | 73.58 | 73.69 |
| Solyc02g062700.2.1 | Tomato | nucleus | 74.37 | 73.44 |
| KRH76781 | Soybean | nucleus | 72.63 | 73.32 |
| GSMUA_Achr10P... | Banana | mitochondrion, plasma membrane | 68.04 | 68.36 |
| Zm00001d051572_P001 | Maize | mitochondrion | 63.92 | 66.78 |
| EES07394 | Sorghum | mitochondrion | 62.82 | 65.62 |
| Os02t0706500-01 | Rice | mitochondrion | 62.97 | 64.61 |
| Zm00001d017783_P002 | Maize | mitochondrion | 62.66 | 63.97 |
| TraesCS6D01G253600.1 | Wheat | mitochondrion | 60.76 | 62.95 |
| TraesCS6A01G273800.1 | Wheat | mitochondrion | 60.6 | 62.89 |
| TraesCS6B01G300900.1 | Wheat | mitochondrion | 60.44 | 62.62 |
| AT3G03060.1 | Thale cress | plastid | 60.28 | 60.67 |
| AT5G16930.1 | Thale cress | plastid | 60.28 | 59.16 |
| HORVU6Hr1G069110.2 | Barley | plastid | 55.54 | 54.76 |
| AT4G04180.1 | Thale cress | mitochondrion | 15.98 | 16.83 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.2 | EntrezGene:829810 | InterPro:AAA+_ATPase | ProteinID:AEE86674.1 | ArrayExpress:AT4G36580 |
| EnsemblPlantsGene:AT4G36580 | RefSeq:AT4G36580 | TAIR:AT4G36580 | RefSeq:AT4G36580-TAIR-G | EnsemblPlants:AT4G36580.1 | TAIR:AT4G36580.1 |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ncoils:Coil | InterPro:DUF3523 | UniProt:F4JQE9 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0007005 | GO:GO:0008150 | GO:GO:0008270 | GO:GO:0009987 |
| GO:GO:0016043 | RefSeq:NP_195376.2 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF12037 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0025022 | ScanProsite:PS00674 | PANTHER:PTHR23075 | PANTHER:PTHR23075:SF3 | SMART:SM00382 |
| SUPFAM:SSF52540 | UniParc:UPI0001E92EE4 | SEG:seg | : | : | : |
Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4JQE9]
Coordinates
chr4:+:17257760..17260855
Molecular Weight (calculated)
71011.4 Da
IEP (calculated)
9.801
GRAVY (calculated)
-0.641
Length
632 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS SRFRFPFFSS SPSPPPSDSP ANQSSSKSKA EPDEPKGSGF DPEALERAAK ALRDINSSPH SKQVFDLMRK
101: QEKTRLAELT AETSHYEAIQ AHNDIGRQQK LAEDQRNLLQ TQAQTKAQNL RYEDELARKR QQTDHEAQRH HNVELVKMQE ASSIRKEKAK IATEEQIQAQ
201: HRQTEKERAE LERETIRVKA MAEAEGRAHE AKLTEEQNRR LLMERINGER EKWLAAINTM FSHIEGGFRT LLTDRNKLIM TVGGATALAA GVYTTREGAR
301: VTWGYINRML GQPSLIRESS MRRFPWTGSV SQFKNRISGA AAASAAEGKK PLDNVILHTS LKKRIERLAR ATANTKSHQA PFRNMMFYGP PGTGKTMVAR
401: EIARKSGLDY AMMTGGDVAP LGSQAVTKIH QIFDWAKKSN KGLLLFIDEA DAFLCERNST YMSEAQRSAL NALLFRTGDQ SRDIVLVLAT NRRGDLDSAV
501: TDRIDEVIEF PLPGEEERFK LLNLYLNKYL KMGDNNEDTK PKWSHLFKKL SQKITVEEDL TDKVISEAAK KTEGFSGREI AKLVAGVQAG VYGRADCVLD
601: SQLFKEIVEY KVEEHHRRHM LASEGFQPLL FS
101: QEKTRLAELT AETSHYEAIQ AHNDIGRQQK LAEDQRNLLQ TQAQTKAQNL RYEDELARKR QQTDHEAQRH HNVELVKMQE ASSIRKEKAK IATEEQIQAQ
201: HRQTEKERAE LERETIRVKA MAEAEGRAHE AKLTEEQNRR LLMERINGER EKWLAAINTM FSHIEGGFRT LLTDRNKLIM TVGGATALAA GVYTTREGAR
301: VTWGYINRML GQPSLIRESS MRRFPWTGSV SQFKNRISGA AAASAAEGKK PLDNVILHTS LKKRIERLAR ATANTKSHQA PFRNMMFYGP PGTGKTMVAR
401: EIARKSGLDY AMMTGGDVAP LGSQAVTKIH QIFDWAKKSN KGLLLFIDEA DAFLCERNST YMSEAQRSAL NALLFRTGDQ SRDIVLVLAT NRRGDLDSAV
501: TDRIDEVIEF PLPGEEERFK LLNLYLNKYL KMGDNNEDTK PKWSHLFKKL SQKITVEEDL TDKVISEAAK KTEGFSGREI AKLVAGVQAG VYGRADCVLD
601: SQLFKEIVEY KVEEHHRRHM LASEGFQPLL FS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.