Factsheet for GSMUA_Achr10P20480_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0023g01900.t01	Wine grape	plastid	73.45	73.68
PGSC0003DMT400040085	Potato	extracellular	41.02	72.47
GSMUA_Achr5P03650_001	Banana	cytosol	51.03	71.49
CDY36475	Canola	plastid	71.54	71.43
CDY64607	Canola	plastid	66.45	70.02
KRH76781	Soybean	nucleus	69.63	69.97
KRH28685	Soybean	nucleus	70.11	69.89
Bra011692.1-P	Field mustard	plastid	66.45	69.78
CDX69234	Canola	cytosol, plastid	65.98	69.4
Solyc02g062700.2.1	Tomato	nucleus	70.43	69.22
AT2G18330.1	Thale cress	plastid	69.79	69.03
Zm00001d051572_P001	Maize	mitochondrion	66.14	68.76
EES07394	Sorghum	mitochondrion	65.5	68.1
AT4G36580.1	Thale cress	plastid	68.36	68.04
Os02t0706500-01	Rice	mitochondrion	66.3	67.69
CDY30315	Canola	plastid	70.27	66.77
TraesCS6D01G253600.1	Wheat	mitochondrion	64.71	66.72
Zm00001d017783_P002	Maize	mitochondrion	65.5	66.56
TraesCS6B01G300900.1	Wheat	mitochondrion	64.55	66.56
TraesCS6A01G273800.1	Wheat	mitochondrion	64.23	66.34
GSMUA_Achr4P17050_001	Banana	vacuole	62.8	64.65
PGSC0003DMT400008178	Potato	cytosol, mitochondrion, peroxisome	11.76	64.35
CDY51218	Canola	plastid	70.27	61.65
Bra024472.1-P	Field mustard	plastid	40.7	61.54
Bra037225.1-P	Field mustard	plastid	70.43	61.36
HORVU6Hr1G069110.2	Barley	plastid	60.1	58.97
CDY29229	Canola	mitochondrion	31.16	53.41
CDX96098	Canola	mitochondrion	19.55	51.68
GSMUA_Achr5P03640_001	Banana	extracellular	13.67	51.19
Bra028131.1-P	Field mustard	nucleus	21.62	46.9
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	18.76	42.45
GSMUA_Achr7P19880_001	Banana	cytosol	14.15	23.42
GSMUA_Achr10P...	Banana	cytosol	11.92	18.89
GSMUA_Achr7P19890_001	Banana	cytoskeleton, cytosol, peroxisome	4.29	17.65

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil
InterPro:DUF3523	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:GSMUA_Achr10G20480_001	EnsemblPlants:GSMUA_Achr10P20480_001	EnsemblPlants:GSMUA_Achr10T20480_001	UniProt:M0RJX3
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3
SMART:SM00382	SUPFAM:SSF52540	SignalP:SignalP-noTM	UniParc:UPI0002967EAB	SEG:seg	:

Description

Putative ATPase family AAA domain-containing protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr10G20480_001]

Coordinates

chr10:-:26439402..26446382

Molecular Weight (calculated)

69986.8 Da

IEP (calculated)

9.473

GRAVY (calculated)

-0.491

Length

629 amino acids

Sequence
(BLAST)

001: MLRLSRSAAA LSATAAAAAA LAALSDHAYA DGTFRFPYLS SPSPTPAAPA VPTAGTRPPG EAPDAASSSS TSSGGFDPEA LERGAKALRE INSSPHAKQV
101: FELMRKQEET RLAEVAAEKT QYLAMQAEGE IEKQRKLAEE QRNLVQQQAQ AKAQMARYED ELARKRMQIE HEAQRRQNVE LVRMQEESSV RKEQVRRATE
201: EQIQAQLRQT EKERAEIERE TIRVKAMAEA EGRAHEAKLT EEHNRKMLLE HMKGEREKWI AAINTTFSHI EGGLRMLLTD RGTLIMAVGG VTALAAGIYT
301: TREGARVIWG YVNRILGQPS LIRESSIAKF PWSGLAPKIK KIVSSSGAAL GKETSLENGS NFDKIILHPS LKKRIEQLAR ATENTKSHQA PFRNMLFYGP
401: PGTGKTLVAR EIARKSGLDY AMMTGGDVAP LGSEAVTKIH QIFDWAKKSR KGLLLFIDEA DAFLCERNSI HMSEAQRSAL NALLFRTGDQ SRDTVLVLAT
501: NRPGDLDAAV TDRMDEVIEF PLPGEEERYK LLKLYLGQYI LQEGDGQLWW NSLFKKQQQK ILVKDMTEDV LREGARKTAG FSGREIAKLM ASVQAAVYGR
601: PNCMLDSELF MEIVNYKVTE HHQRTKLAT

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.