CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30315	Canola	plastid	85.77	92.9
CDY36475	Canola	plastid	80.2	91.27
AT2G18330.1	Thale cress	plastid	76.29	86.01
PGSC0003DMT400040085	Potato	extracellular	39.75	80.06
CDY64607	Canola	plastid	66.11	79.4
CDX69234	Canola	cytosol, plastid	65.97	79.1
VIT_04s0023g01900.t01	Wine grape	plastid	66.11	75.6
Solyc02g062700.2.1	Tomato	nucleus	67.22	75.31
KRH76781	Soybean	nucleus	64.85	74.28
KRH28685	Soybean	nucleus	64.71	73.53
CDY23468	Canola	cytosol	37.8	70.94
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	61.65	70.27
CDY16967	Canola	cytosol	36.82	68.22
CDY29229	Canola	mitochondrion	34.45	67.3
Zm00001d051572_P001	Maize	mitochondrion	56.76	67.27
EES07394	Sorghum	mitochondrion	55.93	66.28
Os02t0706500-01	Rice	mitochondrion	55.37	64.45
TraesCS6D01G253600.1	Wheat	mitochondrion	54.53	64.1
Zm00001d017783_P002	Maize	mitochondrion	55.23	63.97
TraesCS6A01G273800.1	Wheat	mitochondrion	54.11	63.71
TraesCS6B01G300900.1	Wheat	mitochondrion	54.11	63.61
CDY43155	Canola	plastid	50.91	62.93
CDX69409	Canola	plastid	53.97	60.47
CDY28733	Canola	plastid	52.86	60.35
CDY49920	Canola	plastid	53.7	60.25
CDX96098	Canola	mitochondrion	19.8	59.66
CDX85480	Canola	plastid	50.35	58.23
CDY38078	Canola	plastid	50.07	57.62
HORVU6Hr1G069110.2	Barley	plastid	51.05	57.1
CDY16968	Canola	cytosol, extracellular, plastid	12.69	38.72
CDY23469	Canola	plastid	8.79	36.42
CDY16678	Canola	cytosol	3.21	20.18
CDX68520	Canola	cytosol	4.32	20.13
CDX94544	Canola	mitochondrion	14.09	16.58
CDX83073	Canola	endoplasmic reticulum	7.95	15.0
CDY16679	Canola	mitochondrion	3.91	14.36
CDY71527	Canola	mitochondrion	4.32	11.79
CDX68521	Canola	mitochondrion	1.81	8.97

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078IQ34	UniProt:A0A078IQ34	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	EnsemblPlants:CDY51218	ProteinID:CDY51218	ProteinID:CDY51218.1	ncoils:Coil	InterPro:DUF3523
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	EnsemblPlantsGene:GSBRNA2T00002974001	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674
PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EE3E50	SEG:seg

Description

BnaC09g09730DBnaC09g09730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQ34]

Coordinates

chrLK032976:+:20881..25265

Molecular Weight (calculated)

80643.7 Da

IEP (calculated)

9.732

GRAVY (calculated)

-0.685

Length

717 amino acids

Sequence
(BLAST)

001: MAASRLCSAA AIAAAFTSAS MSPNRAYADS QFRFPFFSSS SSTPSESQTD QPSPETDERK GSGFDPESLE RGAKALREIN KSPHSKQVFD LMRKQEKIRL
101: AELAADKSHN EAVQAHKDIE RQQKLAEDQR NLLQQQAQAK AQNLRYEDEL ARKRLQTDHE AQRRHNVELV KMQEESSTRK EQARIATEEQ IQAQQRQTEK
201: ERAELERETI RVKAMAEAEG RAHEAKLTEE QNRRMLLDRI NGEREKWLAA INTTFSHIEG GVKALLTDRN KLIMTVGGAT ALAAGVYTTR EGARVTWGYI
301: NRILGQPSLI RESSMGRFPW AGSVSQYKNK ISKFGKAASA KGENPLDNVV LHPSLKKRIE HLARATANTK SHQAPFRNMM FYGPPGTGKT MVAREIARKS
401: GLDYAMMTGG DVAPLGAQAV TKIHEIFDWA KKSNKGLLLF IDEADAFLCE RNSTYMSEAQ RSALNALLFR TGDQSRDIVL VLATNRPGDL DSAVTDRIDE
501: VIEFPLPGED ERFKLIKLYL NKYLTGEDKK DTNTKWSHFF KKQSQKITVE GDLTEQVIRV AARKTEGFSG REIAKLVAGV QAAVYGRPDC VLDSQLFEEI
601: VDYKIQEHHQ RARLATEGDQ SFLYDKMDRR TGFGTAGTYL AEEKTPARRR LLKTLKTRPL HHSWAGWVCD KIITLDFAHD KAGNAKDMAI DAKGMAYDKA
701: GNAKEMAYEK ARHLQMT

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.