CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G18330.1	Thale cress	plastid	88.57	87.74
CDY30315	Canola	plastid	91.9	87.46
CDY64607	Canola	plastid	76.83	81.07
CDX69234	Canola	cytosol, plastid	76.83	80.94
PGSC0003DMT400040085	Potato	extracellular	45.56	80.62
CDY51218	Canola	plastid	91.27	80.2
VIT_04s0023g01900.t01	Wine grape	plastid	76.98	77.35
Solyc02g062700.2.1	Tomato	nucleus	77.3	76.09
KRH28685	Soybean	nucleus	75.87	75.75
KRH76781	Soybean	nucleus	75.24	75.72
CDY29229	Canola	mitochondrion	42.06	72.21
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	71.43	71.54
CDY23468	Canola	cytosol	43.02	70.94
CDY16967	Canola	cytosol	42.06	68.48
Zm00001d051572_P001	Maize	mitochondrion	65.71	68.43
EES07394	Sorghum	mitochondrion	64.6	67.27
Zm00001d017783_P002	Maize	mitochondrion	64.29	65.43
Os02t0706500-01	Rice	mitochondrion	63.65	65.1
TraesCS6D01G253600.1	Wheat	mitochondrion	62.86	64.92
TraesCS6A01G273800.1	Wheat	mitochondrion	62.22	64.37
TraesCS6B01G300900.1	Wheat	mitochondrion	62.06	64.1
CDY43155	Canola	plastid	58.89	63.97
CDX69409	Canola	plastid	62.7	61.72
CDY49920	Canola	plastid	62.38	61.5
CDY28733	Canola	plastid	61.11	61.31
CDX96098	Canola	mitochondrion	23.02	60.92
CDX85480	Canola	plastid	58.89	59.84
CDY38078	Canola	plastid	58.41	59.07
HORVU6Hr1G069110.2	Barley	plastid	58.25	57.25
CDY16968	Canola	cytosol, extracellular, plastid	15.71	42.13
CDY23469	Canola	plastid	11.11	40.46
CDX68520	Canola	cytosol	4.76	19.48
CDY16678	Canola	cytosol	3.33	18.42
CDX94544	Canola	mitochondrion	16.19	16.75
CDX83073	Canola	endoplasmic reticulum	9.05	15.0
CDY16679	Canola	mitochondrion	4.29	13.85
CDY71527	Canola	mitochondrion	5.08	12.17
CDX68521	Canola	mitochondrion	2.06	8.97

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	GO:A0A078HDP0	UniProt:A0A078HDP0	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	EnsemblPlants:CDY36475	ProteinID:CDY36475	ProteinID:CDY36475.1	ncoils:Coil	InterPro:DUF3523
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	EnsemblPlantsGene:GSBRNA2T00062134001	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674
PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EC8786	SEG:seg

Description

BnaC03g48340DBnaC03g48340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDP0]

Coordinates

chrLK032377:+:48429..51229

Molecular Weight (calculated)

70612.7 Da

IEP (calculated)

9.575

GRAVY (calculated)

-0.687

Length

630 amino acids

Sequence
(BLAST)

001: MAASRLCSAA AIAAAFTSMS TSHNLAYADS RFRFPFFSSS SQPPSESPAD QSSSETKPEP DERKGSGFDP ESLERGAKAL REINNSPHSK QVFDLMRKQE
101: KTRLAELAAE KSRNEAVQAQ NDIERQRKLA EDQRNLLQQQ AQAKAQNLRY EDELARKRLQ TDHEAQRRHN VELVKMQEES SIRKEQARIA TEEQIQAQQR
201: QTEKERAELE RETIRVKAMA EAEGRAHEAK LTEEQNRRML LDKINGEREK WLAAINTTFS HIEGGVKALL TDRNKLIMTV GGATALAAGV YTTREGAKVT
301: WGYINRILGQ PSLIRESSMG RFPWAGSVSK FKNKVSKFGK AASAKGENPL DNVVLHPSLK KRIEHLARAT ANTKSHQAPF RNMMFYGPPG TGKTMVAREI
401: ARKSGLDYAM MTGGDVAPLG AQAVTKIHEI FDWAKKSNKG LLLFIDEADA FLCERNSMYM SEAQRSALNA LLFRTGDQSR DIVLVLATNR PGDLDSAVTD
501: RIDEVIEFPL PGEDERFKLL KLYLNKYLTG EDQKGDKDTK TKWSHLFKKQ SQKITVEGDL TDQVIREAAK KTEGFSGREI AKLVAGVQAA VYGRPDCVLD
601: AQLFEEIVDY KIQEHHQRAR LATEGGQSFP

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.