CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23468	Canola	cytosol	88.37	89.53
PGSC0003DMT400008177	Potato	cytosol	16.8	61.32
CDX69409	Canola	plastid	99.48	60.16
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	78.81	59.8
CDY43155	Canola	plastid	87.08	58.1
TraesCS6B01G294300.1	Wheat	peroxisome	79.59	57.68
CDX85480	Canola	plastid	89.41	55.81
AT5G16930.1	Thale cress	plastid	92.51	55.59
CDY38078	Canola	plastid	88.63	55.06
CDY49920	Canola	plastid	87.6	53.05
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	78.81	52.77
CDY28733	Canola	plastid	85.53	52.71
VIT_16s0039g02110.t01	Wine grape	plasma membrane	83.72	51.35
KRH24032	Soybean	mitochondrion, nucleus	80.88	50.73
KRH29004	Soybean	nucleus	80.88	50.48
GSMUA_Achr4P17050_001	Banana	vacuole	79.07	50.08
Solyc03g097020.2.1	Tomato	nucleus	80.36	49.21
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	79.59	48.43
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	79.59	48.43
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	78.81	48.03
Os02t0697600-01	Rice	mitochondrion	78.55	47.5
EES07415	Sorghum	plastid	79.33	47.3
Zm00001d017707_P003	Maize	plastid	78.04	46.89
Zm00001d051535_P001	Maize	plastid	78.04	46.18
CDY64607	Canola	plastid	68.22	44.22
CDX69234	Canola	cytosol, plastid	67.7	43.81
CDY36475	Canola	plastid	68.48	42.06
CDY30315	Canola	plastid	67.96	39.73
CDY29229	Canola	mitochondrion	37.21	39.24
CDY51218	Canola	plastid	68.22	36.82
CDX68520	Canola	cytosol	6.2	15.58
CDY16678	Canola	cytosol	4.39	14.91
CDX96098	Canola	mitochondrion	8.01	13.03
CDY16679	Canola	mitochondrion	6.46	12.82
CDX94544	Canola	mitochondrion	19.12	12.15
CDX83073	Canola	endoplasmic reticulum	9.04	9.21
CDX68521	Canola	mitochondrion	2.07	5.52
CDY71527	Canola	mitochondrion	2.07	3.04
CDY23469	Canola	plastid	0.78	1.73
CDY16968	Canola	cytosol, extracellular, plastid	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078FW39	UniProt:A0A078FW39	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
EnsemblPlants:CDY16967	ProteinID:CDY16967	ProteinID:CDY16967.1	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
EnsemblPlantsGene:GSBRNA2T00094900001	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EF06AE	:	:

Description

BnaC09g40940DBnaC09g40940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW39]

Coordinates

chrLK032068:-:628164..630029

Molecular Weight (calculated)

42447.2 Da

IEP (calculated)

10.110

GRAVY (calculated)

-0.318

Length

387 amino acids

Sequence
(BLAST)

001: MLVDRANAER EKWVSAINTT FDHIGGGLRM ILTDQNKLVV AVGGITALAA GIYTTREGAK VIWSYVDRVL GQPSLIRESS RGKYPWSGSL SRVFSTLRGG
101: GKEAASKNGK GFGDVILHPS LQKRIEQLAS ATANTKSHQA PFRNMLFYGP PGTGKTMAAR ELARKSGLDY ALMTGGDVAP LGAQAVTKIH QLFDWSKKSK
201: RGLLLFIDEA DAFLCERNKT YMSEAQRSAL NALLFRTGDQ SKDIVLALAT NRPGDLDSAV ADRVDETLEF PLPGEEERFK LLNLYLDKYI TKTNLKKPGL
301: LQSLFKKDQQ KIEVKGVTED LLKEAAAKTK GFSGREIAKL MASVQAAVYG SADCLLDTNL FREVIDYKVA EHIQRKKLAG TDTGNKK

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.