Factsheet for Zm00001d017707_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07415	Sorghum	plastid	93.48	92.76
Zm00001d051535_P001	Maize	plastid	92.7	91.28
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	63.82	80.59
TraesCS6B01G294300.1	Wheat	peroxisome	66.3	79.96
CDY23468	Canola	cytosol	46.74	78.8
CDY16967	Canola	cytosol	46.89	78.04
Os02t0697600-01	Rice	mitochondrion	76.86	77.34
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	69.25	77.16
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	75.62	76.57
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	75.47	76.42
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	74.07	75.12
GSMUA_Achr4P17050_001	Banana	vacuole	68.01	71.69
VIT_16s0039g02110.t01	Wine grape	plasma membrane	67.86	69.26
KRH24032	Soybean	mitochondrion, nucleus	65.99	68.88
KRH29004	Soybean	nucleus	66.15	68.71
Solyc03g097020.2.1	Tomato	nucleus	67.08	68.35
Bra021376.1-P	Field mustard	plastid	62.42	68.14
CDY43155	Canola	plastid	60.71	67.41
Bra032021.1-P	Field mustard	plastid	60.56	67.24
AT3G03060.1	Thale cress	plastid	64.91	66.56
CDX69409	Canola	plastid	65.68	66.09
Bra008582.1-P	Field mustard	plastid	59.32	65.52
CDY28733	Canola	plastid	63.66	65.29
AT5G16930.1	Thale cress	plastid	65.22	65.22
CDY49920	Canola	plastid	64.6	65.1
CDX85480	Canola	plastid	61.18	63.55
Bra023590.1-P	Field mustard	plastid	61.34	62.3
CDY38078	Canola	plastid	60.25	62.28
PGSC0003DMT400008177	Potato	cytosol	9.94	60.38
Zm00001d051572_P001	Maize	mitochondrion	52.8	56.2
Zm00001d017783_P002	Maize	mitochondrion	52.17	54.28
CDY23469	Canola	plastid	11.34	42.2
CDY16968	Canola	cytosol, extracellular, plastid	15.06	41.28
Zm00001d007450_P001	Maize	cytosol	2.17	17.28
Zm00001d017988_P002	Maize	mitochondrion	14.91	15.95

Protein Annotations

EntrezGene:100501892	Gene3D:3.40.50.300	MapMan:35.2	UniProt:A0A1D6HGR1	InterPro:AAA+_ATPase	ProteinID:AQK73785.1
ProteinID:AQK73787.1	InterPro:ATPase_AAA_core	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000221C026	EnsemblPlantsGene:Zm00001d017707	EnsemblPlants:Zm00001d017707_P003	EnsemblPlants:Zm00001d017707_T003
SEG:seg	:	:	:	:	:

Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein

Coordinates

chr5:+:204745661..204751145

Molecular Weight (calculated)

71639.4 Da

IEP (calculated)

9.940

GRAVY (calculated)

-0.597

Length

644 amino acids

Sequence
(BLAST)

001: MAAAAAAKAA AAAVSAGAAF VLSSERAHAD GGGSTFRFPG FYSSAPSPAP APAPAPAAPP PQESNAPEEA PKVSTQHPRT SAAGFDPAPL ERGVEAINKL
101: KQASDPKKLF EFMKKQEETH QQEIAAKKLE LQKALAEIEL EQKRVDFEER KKLDQQRAKI KSQMAQYEDE LKRKRLQAEH EAQRLRNQEL VKMQEESGIR
201: LEQIRRATEE QIQEQRRQTE RHRADLEQAT ISKKAMAEAE GRILVTRQTE DVKRRLILEE INADREKWIQ VINTTFEHIG GGLRTILTDQ NKLVVAVGGV
301: TALAAGIYTT REGARVVWGY VDRILGQPSL IRESSRGKYP WSGFLSRATS TLTSKLKNGS NLGKDRNGFG DVILNPSLQK RVKQLANATA NTKLHQAPFR
401: NMLFYGPPGT GKTMAARELA RNSGLDYALM TGGDVAPLGS QAVTKIHQLF DWAKKSNRGL LLFIDEADAF LCERNKTYMS EAQRSALNAL LFRTGDQSKD
501: IVLALATNRP GDLDSAVADR IDEVLEFPLP GEDERFKLLK LYLDKYIIKA GDKHEKSWLQ FFRRQPQKIE VKGITDDLIR EAASRTQGFS GREIAKMMAS
601: VQAAVYGSKD CELTPGLFRE VVDYKVAEHK QRRRLAGEEP KQDA

Best Arabidopsis Sequence Match ( AT5G16930.1 )
(BLAST)

001: MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXI0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.