CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85480	Canola	plastid	93.74	94.19
Bra023590.1-P	Field mustard	plastid	93.9	92.27
CDY16967	Canola	cytosol	55.06	88.63
CDX69409	Canola	plastid	90.21	87.81
AT5G16930.1	Thale cress	plastid	85.23	82.45
CDY23468	Canola	cytosol	49.76	81.15
CDY16968	Canola	cytosol, extracellular, plastid	29.05	77.02
CDY49920	Canola	plastid	77.85	75.9
CDY43155	Canola	plastid	70.14	75.34
CDY28733	Canola	plastid	74.48	73.89
VIT_16s0039g02110.t01	Wine grape	plasma membrane	74.48	73.53
Solyc03g097020.2.1	Tomato	nucleus	71.91	70.89
KRH24032	Soybean	mitochondrion, nucleus	69.98	70.66
TraesCS6B01G294300.1	Wheat	peroxisome	60.51	70.6
KRH29004	Soybean	nucleus	69.98	70.32
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	57.14	69.8
CDY23469	Canola	plastid	18.78	67.63
GSMUA_Achr4P17050_001	Banana	vacuole	66.29	67.59
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	62.6	67.47
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	65.49	64.15
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	65.49	64.15
Os02t0697600-01	Rice	mitochondrion	65.33	63.59
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	64.53	63.31
EES07415	Sorghum	plastid	63.88	61.33
PGSC0003DMT400008177	Potato	cytosol	10.27	60.38
Zm00001d017707_P003	Maize	plastid	62.28	60.25
Zm00001d051535_P001	Maize	plastid	62.28	59.33
CDY64607	Canola	plastid	56.82	59.3
CDX69234	Canola	cytosol, plastid	56.18	58.53
CDY36475	Canola	plastid	59.07	58.41
CDY30315	Canola	plastid	57.78	54.38
CDY51218	Canola	plastid	57.62	50.07
CDY29229	Canola	mitochondrion	28.25	47.96
CDX96098	Canola	mitochondrion	17.01	44.54
CDX68520	Canola	cytosol	4.82	19.48
CDX94544	Canola	mitochondrion	16.53	16.91
CDY16679	Canola	mitochondrion	4.82	15.38
CDY16678	Canola	cytosol	2.73	14.91
CDY71527	Canola	mitochondrion	6.26	14.83
CDX83073	Canola	endoplasmic reticulum	8.67	14.21
CDX68521	Canola	mitochondrion	2.57	11.03

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	GO:A0A078HMP8	UniProt:A0A078HMP8	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
EnsemblPlants:CDY38078	ProteinID:CDY38078	ProteinID:CDY38078.1	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
EnsemblPlantsGene:GSBRNA2T00065345001	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EF4217	SEG:seg	:	:

Description

BnaC02g06950DBnaC02g06950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMP8]

Coordinates

chrLK032416:-:7669..10900

Molecular Weight (calculated)

68858.8 Da

IEP (calculated)

9.797

GRAVY (calculated)

-0.600

Length

623 amino acids

Sequence
(BLAST)

001: MAQKCAIGLI SALAASASLS KSNVASADGP PLTFSAFSAS PTPQQQGSTT PPAPGSGEES DAPPRIRNDN PRTTSAGFDP EALERGAKTV KGINNSAHAK
101: KVFESIKTQE ETRQAEFTAK AQEFKAVQSQ AEAERQRVIH EEQKKLAQHQ AQTKAQMARY EDELARKRMQ ACHSTNTFLK HNIEDIYFFF LTTQRTRNQE
201: LVRMQEESAI RREGARRATE EEIQAQRRQT EREKAEIERE TMRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRMILTD
301: QNKLVVAVGG ITALAAGIYT TREGAKVIWS YVDRGGGKEA ASTNGKGFGD VILHPSLQKR IEQLASATAN TKSHQAPFRN MLFYGPPGTG KTMAARELAR
401: KSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDT VLALATNRPG DLDSAVADRV
501: DETLEFPLPG EEERFKLLNL YLDKYITKTN LKKPGLLQSL FKKDHMKIEV KGVTEDLLKE AAAKTKGFSG REIAKLMASV QAAVYGSAEC LLDANLFREV
601: IDYKVAEHQQ RKKLAGTDTG NKK

Best Arabidopsis Sequence Match ( AT5G16930.1 )
(BLAST)

001: MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXI0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.