CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032021.1-P	Field mustard	plastid	98.97	98.97
CDY23468	Canola	cytosol	62.93	95.55
CDY28733	Canola	plastid	96.72	89.33
CDY16967	Canola	cytosol	58.1	87.08
AT3G03060.1	Thale cress	plastid	87.41	80.73
CDY49920	Canola	plastid	88.45	80.28
KRH24032	Soybean	mitochondrion, nucleus	78.62	73.91
CDX69409	Canola	plastid	81.38	73.75
VIT_16s0039g02110.t01	Wine grape	plasma membrane	79.83	73.38
Solyc03g097020.2.1	Tomato	nucleus	78.97	72.47
KRH29004	Soybean	nucleus	77.24	72.26
CDX85480	Canola	plastid	76.72	71.77
GSMUA_Achr4P17050_001	Banana	vacuole	75.34	71.52
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	62.41	70.98
TraesCS6B01G294300.1	Wheat	peroxisome	65.17	70.79
CDY38078	Canola	plastid	75.34	70.14
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	67.93	68.17
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	69.83	63.68
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	69.83	63.68
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	68.79	62.83
Os02t0697600-01	Rice	mitochondrion	69.14	62.66
PGSC0003DMT400008177	Potato	cytosol	11.38	62.26
EES07415	Sorghum	plastid	69.14	61.79
CDY64607	Canola	plastid	62.76	60.97
Zm00001d017707_P003	Maize	plastid	67.41	60.71
Zm00001d051535_P001	Maize	plastid	67.93	60.24
CDX69234	Canola	cytosol, plastid	61.72	59.87
CDY36475	Canola	plastid	63.97	58.89
CDY30315	Canola	plastid	63.1	55.29
CDY51218	Canola	plastid	62.93	50.91
CDY23469	Canola	plastid	14.66	49.13
CDY29229	Canola	mitochondrion	30.86	48.77
CDY16968	Canola	cytosol, extracellular, plastid	18.97	46.81
CDX96098	Canola	mitochondrion	16.03	39.08
CDX68520	Canola	cytosol	5.34	20.13
CDX94544	Canola	mitochondrion	17.41	16.58
CDY16678	Canola	cytosol	3.1	15.79
CDX83073	Canola	endoplasmic reticulum	9.14	13.95
CDY16679	Canola	mitochondrion	4.66	13.85
CDY71527	Canola	mitochondrion	5.69	12.55
CDX68521	Canola	mitochondrion	2.76	11.03

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	GO:A0A078HXD3	UniProt:A0A078HXD3	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
EnsemblPlants:CDY43155	ProteinID:CDY43155	ProteinID:CDY43155.1	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
EnsemblPlantsGene:GSBRNA2T00076130001	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EDE5C6	SEG:seg	:	:

Description

BnaA05g32310DBnaA05g32310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXD3]

Coordinates

chrLK032546:-:230096..233094

Molecular Weight (calculated)

63872.6 Da

IEP (calculated)

9.362

GRAVY (calculated)

-0.589

Length

580 amino acids

Sequence
(BLAST)

001: MAQKCAIGFI SAIAAASSSF SKSKVAAADG PPPQHQAASD PESSAPPRSR NDNPRTSSGG FDPEALERGA NALKEINSSS YAKQVFEGIK QKEETKQTEF
101: AAKGQEYKAM QAQAETERQK AENEYHRTRN QELVKMQEDS AIRQEQSRRA TEEQIQAQRR QTEREKAEIE RETIRVKSIA EAEGRAHEAR LAEDVNRRML
201: VDRANAEREK WVAAINTTFE HIGGGLRAIL TDQNKLIVAV GGATALAAGI YTTREGARVI WSYVDRILGQ PSLIRESSRG KYPWSGSVSR ALSTLRGKGS
301: AIKNGKGFGD VILHPSLQKR IEHLAKATAN TKSHQAPFRN MLFYGPPGTG KTMVARELAR KSGLDYALMT GGDVAPLGSQ AVTKIHQLFD WGKKSKRGLL
401: LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI VLALATNRPG DLDSAVADRV DEVLEFPLPG EGERSKLLSL YLEKYIAQAG PTKPGLFDRL
501: FKKEQQKIEI KGVTEELLEE AAAKTDGFSG REIAKLMASV QAAVYGSEDC VLDSVLFREV VDYKVAEHQQ RRKLAGTDTE

Best Arabidopsis Sequence Match ( AT3G03060.1 )
(BLAST)

001: MAQKCAIGLI SALAASASLA KSKVASADGP FNLSGFSTSA NPQQQASPPP PSLAGEESSA PPRARNDNPR TSSGGFDPEA LERGAKALKE INHSSYAKKV
101: FESIKQQEET KQTEFATKAQ EFKAMQAQAE TERHKVIYDE QKKLAQHQAQ TKSQMARYED DLARKRMQAE NEFHRTRNQE LVKMQEDSAI RQEQARRATE
201: EQIQAQRRQT EREKAEIERE TIRVKAIAEA EGRAHEARLA EDVNRRMLVD RANAEREKWV AAINTTFDHI GGGLRAILTD QNKLIVAVGG VTALAAGIYT
301: TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSLSRVM STLRGKESAS KNGKRFGDVI LHPPLAKRIE HLATSTANTK LHQAPFRNIL LHGPPGTGKT
401: MAARELARKS GLDYALMTGG DVAPLGAQAV TKIHELFDWG KKSKRGLLLF IDEADAFLCE RNKTYMSEAQ RSALNALLFR TGDQSKDIVL ALATNRPGDL
501: DSAVADRVDE VLEFPLPGEE ERFKLLNLYL EKYIAEAGPS KPGLFDRLFK KEQQKIEIKG VTEELLKEAA AKTEGFSGRE IAKLMASVQA AVYGSEDCVL
601: DSMLFREVVD YKVAEHQQRR KLAGVDSK

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WVF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.