Factsheet for Os02t0697600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 2
cytosol 1
nucleus 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

mitochondrion: 19010998
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23468	Canola	cytosol	48.28	80.89
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	63.91	80.2
TraesCS6B01G294300.1	Wheat	peroxisome	66.41	79.59
CDY16967	Canola	cytosol	47.5	78.55
EES07415	Sorghum	plastid	78.75	77.66
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	69.53	76.99
Zm00001d017707_P003	Maize	plastid	77.34	76.86
Zm00001d051535_P001	Maize	plastid	76.72	75.08
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	74.53	75.0
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	74.38	74.84
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	73.28	73.86
GSMUA_Achr4P17050_001	Banana	vacuole	67.97	71.19
VIT_16s0039g02110.t01	Wine grape	plasma membrane	70.16	71.16
KRH29004	Soybean	nucleus	68.91	71.13
KRH24032	Soybean	mitochondrion, nucleus	67.97	70.5
Solyc03g097020.2.1	Tomato	nucleus	69.06	69.94
CDY43155	Canola	plastid	62.66	69.14
Bra032021.1-P	Field mustard	plastid	62.5	68.97
Bra021376.1-P	Field mustard	plastid	63.12	68.47
AT3G03060.1	Thale cress	plastid	67.03	68.31
CDY28733	Canola	plastid	66.56	67.83
CDX69409	Canola	plastid	67.34	67.34
CDY49920	Canola	plastid	66.88	66.98
Bra008582.1-P	Field mustard	plastid	60.78	66.72
AT5G16930.1	Thale cress	plastid	67.03	66.61
CDX85480	Canola	plastid	63.91	65.97
CDY38078	Canola	plastid	63.59	65.33
Bra023590.1-P	Field mustard	plastid	64.22	64.83
PGSC0003DMT400008177	Potato	cytosol	10.0	60.38
Os02t0706500-01	Rice	mitochondrion	53.59	55.68
CDY16968	Canola	cytosol, extracellular, plastid	17.03	46.38
CDY23469	Canola	plastid	12.19	45.09
Os02t0740300-01	Rice	mitochondrion	16.56	17.35
Os02t0740400-02	Rice	extracellular	9.38	15.67

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	EntrezGene:4330409	InterPro:AAA+_ATPase	EMBL:AK121757	InterPro:ATPase_AAA_core
ProteinID:BAD07862.1	ProteinID:BAF09735.1	ProteinID:BAS80431.1	ProteinID:BAS80432.1	ncoils:Coil	InterPro:DUF3523
ProteinID:EAZ24278.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:Os02g0697600	EnsemblPlants:Os02t0697600-01	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF12037	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	UniProt:Q6Z8F7	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI0000236826	RefSeq:XP_015626601.1	SEG:seg	:	:	:

Description

ATPase, AAA-type, core domain containing protein. (Os02t0697600-01);Similar to ATPase family AAA domain-containing protein 3. (Os02t0697600-02)

Coordinates

chr2:+:28689500..28694158

Molecular Weight (calculated)

71272.2 Da

IEP (calculated)

9.978

GRAVY (calculated)

-0.595

Length

640 amino acids

Sequence
(BLAST)

001: MAAAAAKAAA AALSTAGVVA FSSERAYADG GAPAFRFPGF SAPPTPPPAA QPPPPTPPAP APAAEEKRKV RNDHPRTSAA GFDPEALERG AAMLKQIENS
101: PHGKKVFEIL KQQEDVRRAE NLTKKVEFQK ELAAIELEKT RVDYDERKKL EQQRAQVKSQ MSRYEDELAR KRMQADHEAQ RVRNQELVKM QEESAIRQEQ
201: MRRAIEEQIQ EERRKTDRAK AIVEKEIEQE KILAEANARI KLKKQTEDVE RRLLIEGAKA EKEKWVQLIN TTFEHIGGGL QTILTDQNKL VVAVGGVTAL
301: AAGIYTTREG ARVVWGYVDR ILGQPSLIRE SSRGKYPWSG VFSRAMSTMT SKLNKGSNLG NNGNGFGDVI LNPSLQKRVK QLANATANTK LHQAPFRNML
401: FYGPPGTGKT MAARELARKS GLDYALMTGG DVAPLGSQAV TKIHQLFDWA KKSNRGLLLF IDEADAFLCE RNKTYMSEAQ RSALNALLFR TGDQSKDIVL
501: ALATNRPGDL DSAVADRIDE VLEFPLPGED ERSKLFKLYL DKYIMKAGEK HEKSWLRFFR GQPQKIEVKG VTDDLIREAA AKTEGFSGRE IAKLMASVQA
601: AVYGSKECVL TPDLFREVVD YKVAEHQQRR RLAGYEQKNA

Best Arabidopsis Sequence Match ( AT5G16930.1 )
(BLAST)

001: MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXI0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.