Factsheet for Bra023590.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85480	Canola	plastid	93.53	95.65
CDY38078	Canola	plastid	92.27	93.9
Bra008582.1-P	Field mustard	plastid	81.23	88.34
AT5G16930.1	Thale cress	plastid	85.33	84.01
Bra032021.1-P	Field mustard	plastid	70.19	76.72
Bra021376.1-P	Field mustard	plastid	70.82	76.1
VIT_16s0039g02110.t01	Wine grape	plasma membrane	74.13	74.48
Solyc03g097020.2.1	Tomato	nucleus	72.08	72.31
KRH24032	Soybean	mitochondrion, nucleus	69.72	71.64
KRH29004	Soybean	nucleus	69.87	71.45
TraesCS6B01G294300.1	Wheat	peroxisome	60.09	71.35
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	56.62	70.39
GSMUA_Achr4P17050_001	Banana	vacuole	65.77	68.25
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	62.15	68.17
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	64.98	64.78
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	64.98	64.78
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	64.35	64.25
Os02t0697600-01	Rice	mitochondrion	64.83	64.22
EES07415	Sorghum	plastid	64.04	62.56
Zm00001d017707_P003	Maize	plastid	62.3	61.34
PGSC0003DMT400008177	Potato	cytosol	10.25	61.32
Zm00001d051535_P001	Maize	plastid	62.3	60.4
Bra011692.1-P	Field mustard	plastid	56.62	59.93
Bra024472.1-P	Field mustard	plastid	36.12	55.05
Bra037225.1-P	Field mustard	plastid	56.94	50.0
Bra028131.1-P	Field mustard	nucleus	18.93	41.38
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	16.09	36.69
Bra029485.1-P	Field mustard	mitochondrion	14.67	15.9
Bra029941.1-P	Field mustard	cytosol	5.05	15.61

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra023590	EnsemblPlants:Bra023590.1
EnsemblPlants:Bra023590.1-P	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	UniProt:M4E487	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF12037	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI00025430B2	SEG:seg	:	:	:	:

Description

AT5G16930 (E=4e-204) | AAA-type ATPase family protein

Coordinates

chrA02:+:4100349..4103178

Molecular Weight (calculated)

70159.5 Da

IEP (calculated)

9.781

GRAVY (calculated)

-0.580

Length

634 amino acids

Sequence
(BLAST)

001: MAQKCAIGLI SALAASASFS KSNIASADGP PLTFSGFSTS PTPQPQQGSA TPPAPGSGEE SDAPPRIRND NPRTTSAGFD PEALERGAKT VKGINNSAHA
101: KKVFERIKTQ EETRQAEFAA KAQEFKALQS QAEAERQRVI HEEQKKLAQH QAQTKAQMAR YEDELARKRM QACHSTHTFL NKIEDLYSFL RVMLYILLQA
201: ENEAQRTRNQ ELVRMQEESA IRREGARRAT EEEIQAQRRQ TEREKAEIER ETIRVKAMAE AEGRARESKL SEDVNRRMLV DRANAEREKW VSAINTTFDH
301: IGGGLRMILT DQNKLVVAVG GITALAAGIY TTREGAKVIW SYVDRGGGKE AASTNGKGFG DVILHPSLQK RIEQLASATA NTKSHQAPFR NMLFYGPPGT
401: GKTMAARELA RKSGLDYALM TGGDVAPLGA QAVTKIHQLF DWSKKSKRGL LLFIDEADAF LCERNKTYMS EAQRSALNAL LFRTGDQSKD IVLALATNRP
501: GDLDSAVADR VDETLEFPLP GEEERFKLLN LYLDKYITKT NLKKPGLLQS LFKKDQLKIE VRGVTEDLLK EAAAKTKGFS GREIAKLMAS VQAAVYGSAE
601: CLLDANLFRE VIDYKVAEHQ QRKKLAGTDT GNKK

Best Arabidopsis Sequence Match ( AT5G16930.1 )
(BLAST)

001: MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXI0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.