Factsheet for Bra037225.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30315	Canola	plastid	87.12	95.02
AT2G18330.1	Thale cress	plastid	76.87	87.26
PGSC0003DMT400040085	Potato	extracellular	39.75	80.62
Bra011692.1-P	Field mustard	plastid	65.93	79.47
Solyc02g062700.2.1	Tomato	nucleus	67.31	75.94
VIT_04s0023g01900.t01	Wine grape	plastid	65.65	75.6
KRH76781	Soybean	nucleus	64.4	74.28
Bra024472.1-P	Field mustard	plastid	42.38	73.56
KRH28685	Soybean	nucleus	64.27	73.53
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	61.36	70.43
Zm00001d051572_P001	Maize	mitochondrion	56.93	67.93
EES07394	Sorghum	mitochondrion	56.09	66.94
Os02t0706500-01	Rice	mitochondrion	55.4	64.94
TraesCS6D01G253600.1	Wheat	mitochondrion	54.71	64.75
Zm00001d017783_P002	Maize	mitochondrion	55.4	64.62
TraesCS6A01G273800.1	Wheat	mitochondrion	54.43	64.53
TraesCS6B01G300900.1	Wheat	mitochondrion	54.29	64.26
Bra032021.1-P	Field mustard	plastid	50.28	62.59
Bra021376.1-P	Field mustard	plastid	50.97	62.37
Bra008582.1-P	Field mustard	plastid	48.2	59.69
HORVU6Hr1G069110.2	Barley	plastid	51.25	57.72
Bra023590.1-P	Field mustard	plastid	50.0	56.94
Bra028131.1-P	Field mustard	nucleus	22.16	55.17
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	17.73	46.04
Bra029485.1-P	Field mustard	mitochondrion	14.82	18.29
Bra029941.1-P	Field mustard	cytosol	4.29	15.12

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra037225
EnsemblPlants:Bra037225.1	EnsemblPlants:Bra037225.1-P	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	UniProt:M4F814
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0002541ED6	SEG:seg	:	:

Description

AT2G18330 (E=2e-277) | AAA-type ATPase family protein

Coordinates

chrA09:+:4903489..4907827

Molecular Weight (calculated)

80932.5 Da

IEP (calculated)

8.757

GRAVY (calculated)

-0.722

Length

722 amino acids

Sequence
(BLAST)

001: MAASRLCSAA AIAAAFTSAS MSPNRAYADS RFRFPFFSSS SSTPSESQTD QPSPETKPET DERKGSGFDP ESLERGAKAL REINKSPHSK QVFDLMRKQE
101: KTRLAELAAD KSHNEAVQAR KDIERQQKLA EDQRNLLQQQ AQAKAQNLRY EDELARKRLQ TDHEAQRRHN VELVKMQEES STRKEQARIA TEEQIQAQQR
201: QTEKERAELE RETIRVKAMA EAEGRAHEAK LTEEQNRRML LDRINGEREK WLAAINTTFS HIEGGVKALL TDRSKLIMTV GGATALAAGV YTTREGARVT
301: WGYINRILGQ PSLIRESSMG RFPWAGSVSQ YKNKISKFGK AASAKGENPL DNVVLHPSLK KRIEHLARAT ANTKSHQAPF RNMMFYGPPG TGKTMVAREI
401: ARKSGLDYAM MTGGDVAPLG AQAVTKIHEI FDWAKKSNKG LLLFIDEADA FLCERNSTYM SEAQRSALNA LLFRTGDQSR DIVLVLATNR PGDLDSAVTD
501: RIDEVIEFPL PGEDERFKLI KLYLNKYLTG EDKKDTNTKW SHLFKKQSQK ITVEGDLTDQ VIRDAARKTE GFSGREIAKL VAGVQAAVYG RPDCVLDSQL
601: FEEIVDYKIQ EHHQRARLAT EGDQSFLYDM MDRRSGFGTA GTYLAEGNAG ETETVQDAKD KTASWAGCVC DKIVTQDMAY KEPGHVRDFS YDKASDAKDM
701: AYDKAGNAKE MAYERARHLP MT

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.