Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36475 | Canola | plastid | 87.74 | 88.57 |
| CDY30315 | Canola | plastid | 87.58 | 84.14 |
| AT4G36580.1 | Thale cress | plastid | 83.49 | 84.02 |
| PGSC0003DMT400040085 | Potato | extracellular | 44.97 | 80.34 |
| Bra037225.1-P | Field mustard | plastid | 87.26 | 76.87 |
| CDY51218 | Canola | plastid | 86.01 | 76.29 |
| VIT_04s0023g01900.t01 | Wine grape | plastid | 75.16 | 76.24 |
| Solyc02g062700.2.1 | Tomato | nucleus | 76.42 | 75.94 |
| KRH28685 | Soybean | nucleus | 73.74 | 74.33 |
| KRH76781 | Soybean | nucleus | 72.48 | 73.64 |
| GSMUA_Achr10P... | Banana | mitochondrion, plasma membrane | 69.03 | 69.79 |
| Zm00001d051572_P001 | Maize | mitochondrion | 64.62 | 67.93 |
| EES07394 | Sorghum | mitochondrion | 63.52 | 66.78 |
| Os02t0706500-01 | Rice | mitochondrion | 63.36 | 65.42 |
| TraesCS6D01G253600.1 | Wheat | mitochondrion | 62.42 | 65.08 |
| TraesCS6B01G300900.1 | Wheat | mitochondrion | 61.95 | 64.59 |
| TraesCS6A01G273800.1 | Wheat | mitochondrion | 61.64 | 64.37 |
| Zm00001d017783_P002 | Maize | mitochondrion | 62.58 | 64.3 |
| AT3G03060.1 | Thale cress | plastid | 60.53 | 61.31 |
| AT5G16930.1 | Thale cress | plastid | 60.06 | 59.32 |
| HORVU6Hr1G069110.2 | Barley | plastid | 57.23 | 56.79 |
| AT4G04180.1 | Thale cress | mitochondrion | 16.98 | 18.0 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.2 | EntrezGene:816348 | InterPro:AAA+_ATPase | ProteinID:AAD15504.2 | ProteinID:AEC06757.1 |
| ArrayExpress:AT2G18330 | EnsemblPlantsGene:AT2G18330 | RefSeq:AT2G18330 | TAIR:AT2G18330 | RefSeq:AT2G18330-TAIR-G | EnsemblPlants:AT2G18330.1 |
| TAIR:AT2G18330.1 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EMBL:AY054494 | EMBL:AY093265 | Unigene:At.13881 |
| ncoils:Coil | InterPro:DUF3523 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0007005 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | RefSeq:NP_565435.1 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PFAM:PF12037 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00674 | PANTHER:PTHR23075 | PANTHER:PTHR23075:SF3 | UniProt:Q9ZPW5 |
| SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI000009C6AB | SEG:seg | : | : |
Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
Coordinates
chr2:+:7965635..7969108
Molecular Weight (calculated)
71198.4 Da
IEP (calculated)
9.475
GRAVY (calculated)
-0.677
Length
636 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.