Factsheet for TraesCS6B01G300900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G253600.1	Wheat	mitochondrion	98.36	98.36
TraesCS6A01G273800.1	Wheat	mitochondrion	97.38	97.54
HORVU6Hr1G069110.2	Barley	plastid	83.93	79.88
Os02t0706500-01	Rice	mitochondrion	73.77	73.05
Zm00001d051572_P001	Maize	mitochondrion	71.97	72.56
EES07394	Sorghum	mitochondrion	71.97	72.56
PGSC0003DMT400040085	Potato	extracellular	42.13	72.19
Zm00001d017783_P002	Maize	mitochondrion	71.15	70.11
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	66.56	64.55
CDY64607	Canola	plastid	60.82	62.14
CDY36475	Canola	plastid	64.1	62.06
AT2G18330.1	Thale cress	plastid	64.59	61.95
Bra011692.1-P	Field mustard	plastid	60.82	61.94
Solyc02g062700.2.1	Tomato	nucleus	64.92	61.88
VIT_04s0023g01900.t01	Wine grape	plastid	63.44	61.72
CDX69234	Canola	cytosol, plastid	60.33	61.54
KRH76781	Soybean	nucleus	63.11	61.5
KRH28685	Soybean	nucleus	63.61	61.49
TraesCS6B01G294300.1	Wheat	peroxisome	53.44	61.05
AT4G36580.1	Thale cress	plastid	62.62	60.44
CDY30315	Canola	plastid	63.93	58.91
Bra037225.1-P	Field mustard	plastid	64.26	54.29
CDY51218	Canola	plastid	63.61	54.11
Bra024472.1-P	Field mustard	plastid	36.07	52.88
CDY29229	Canola	mitochondrion	30.66	50.95
PGSC0003DMT400008178	Potato	cytosol, mitochondrion, peroxisome	9.02	47.83
CDX96098	Canola	mitochondrion	15.74	40.34
Bra028131.1-P	Field mustard	nucleus	16.89	35.52
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	13.93	30.58
TraesCS6B01G341600.1	Wheat	cytosol, plastid	15.41	14.66

Protein Annotations

EnsemblPlants:TraesCS6B01G300900.1	EnsemblPlantsGene:TraesCS6B01G300900	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:DUF3523	InterPro:P-loop_NTPase
ncoils:Coil	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674
SEG:seg	SMART:SM00382	SUPFAM:SSF52540	TIGR:cd00009	MapMan:35.2	:

Description

No Description!

Coordinates

chr6B:+:539188671..539192619

Molecular Weight (calculated)

68073.7 Da

IEP (calculated)

9.693

GRAVY (calculated)

-0.517

Length

610 amino acids

Sequence
(BLAST)

001: MRRLLRPAKA AASVAAGAAV LASLGEVAYA DSIFSFRRQP AAPPPPPPPD APAPAAASSG SSGFDPEALE RGARALRQIN GSRYAKLLFG LMQSQEETRL
101: AEMAAEKVHH DIYWKVKEIE AKRKMGEEYR ENLKQQSQIE AQRLRYEDEL AKKSKQEERE AERRRDAELV RMQEIGALKR EQARRATEQK ILEQELQTLK
201: ERAKNDRETN KENAISNAKA KAHEAKLTED YERRMLVELM NGEKEKWLAA INTTFQHIEG GLRTLLTDRS KLVMGIGGVT ALAAGVYTTR EGARVTWGYV
301: NRILGQPSLI RESSMRKFPL PGLKALKPSS ASLSGGAAFE NVILHPSLKR RIEHLARATA NTKSHDAPFR NMLFYGHPGT GKTLVAREMA RKSGLDYAMM
401: TGGDVAPLGS EAVTKIHEIF DWAKKSQKGM LLFIDEADAF LCERNSTHMS EAQRSALNAL LFRTGDQSRD IVLVLATNRP GDLDAAITDR IDEVIEFPLP
501: GEEERFLLLK LYLNNYMLKD DDKSSPWSTL LKKQPKKIHV RDISDDLLRD AARKIDGFSG REIAKLMASV QAAVYGSPDC ILNPQLFSEV VEYKIAEHQQ
601: RMKLASEAAA

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.