Factsheet for Bra024472.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29229	Canola	mitochondrion	64.18	72.75
PGSC0003DMT400008178	Potato	cytosol, mitochondrion, peroxisome	16.35	59.13
Bra011692.1-P	Field mustard	plastid	65.38	45.41
Bra028131.1-P	Field mustard	nucleus	29.81	42.76
Bra037225.1-P	Field mustard	plastid	73.56	42.38
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	28.12	42.09
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	61.54	40.7
Zm00001d051572_P001	Maize	mitochondrion	56.25	38.68
EES07394	Sorghum	mitochondrion	54.57	37.52
Zm00001d017783_P002	Maize	mitochondrion	54.57	36.67
TraesCS6D01G253600.1	Wheat	mitochondrion	53.12	36.23
TraesCS6A01G273800.1	Wheat	mitochondrion	52.88	36.12
Bra023590.1-P	Field mustard	plastid	55.05	36.12
TraesCS6B01G300900.1	Wheat	mitochondrion	52.88	36.07
Bra008582.1-P	Field mustard	plastid	50.0	35.68
Bra021376.1-P	Field mustard	plastid	50.48	35.59
Os02t0706500-01	Rice	mitochondrion	52.4	35.39
Bra032021.1-P	Field mustard	plastid	49.28	35.34
HORVU6Hr1G069110.2	Barley	plastid	51.44	33.39
Bra029485.1-P	Field mustard	mitochondrion	13.94	9.91
Bra029941.1-P	Field mustard	cytosol	3.85	7.8

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.8.60	MapMan:15.5.2.2	Gene3D:3.40.50.300	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra024472	EnsemblPlants:Bra024472.1	EnsemblPlants:Bra024472.1-P	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:Homeobox-like_sf	UniProt:M4E6R7	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF12037	ScanProsite:PS00674	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	InterPro:SANT/Myb	SUPFAM:SSF46689
SUPFAM:SSF52540	UniParc:UPI000253EF8E	SEG:seg	:	:	:

Description

AT2G18330 (E=2e-082) | AAA-type ATPase family protein

Coordinates

chrA06:-:15985616..15988125

Molecular Weight (calculated)

47505.3 Da

IEP (calculated)

7.278

GRAVY (calculated)

-0.753

Length

416 amino acids

Sequence
(BLAST)

001: MASNSIISTS RSSTSSWTAK QDKQFEMALA KFEKDTPDRW QNVARVVGGK SAEEERQRKL AEDQRNLLQQ QAQAKAQNFR YEDELARKRL QTDHESQRRH
101: NVELVKMQEE SSIRKGQARL ATEEQIQAQQ RQTEKERAAL ERETIRVKAM AEAEGRAHEA KLTEEQNRRM LLDKINGEME KWLAAINTTF GHIEGGVKVL
201: LTYRNKLTGG DVAPLDYLAF VKRIVTSMVS SELCLMVYQI LDRKRNSTYM SEAQHSALNA LLFRTGDQSR DIVLVLATNR PGDLDGAVTD RIDEVIEFPL
301: PGEDERFKLL NKYLTGEDQK DDKDMKTKWS HLFKKQAQKI TFEGDLTDQV IREAAKKTEG FSGREIAKLV AGVQAAVYGR PDCVLDAQLF EEIVDYKIQE
401: HHQRARLATE GGQSFP

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.