Factsheet for PGSC0003DMT400008178

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96098	Canola	mitochondrion	53.04	25.63
Bra028131.1-P	Field mustard	nucleus	55.65	22.07
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	53.04	21.94
Bra024472.1-P	Field mustard	plastid	59.13	16.35
CDY29229	Canola	mitochondrion	42.61	13.35
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	64.35	11.76
Zm00001d051572_P001	Maize	mitochondrion	50.43	9.59
TraesCS6D01G253600.1	Wheat	mitochondrion	48.7	9.18
Zm00001d017783_P002	Maize	mitochondrion	48.7	9.05
TraesCS6A01G273800.1	Wheat	mitochondrion	47.83	9.03
TraesCS6B01G300900.1	Wheat	mitochondrion	47.83	9.02
EES07394	Sorghum	mitochondrion	46.09	8.76
HORVU6Hr1G069110.2	Barley	plastid	47.83	8.58
Os02t0706500-01	Rice	mitochondrion	42.61	7.95
PGSC0003DMT400008177	Potato	cytosol	6.09	6.6
PGSC0003DMT400055268	Potato	cytosol	6.96	2.29
PGSC0003DMT400040085	Potato	extracellular	6.96	2.25
PGSC0003DMT400055267	Potato	mitochondrion	2.61	1.33

Protein Annotations

EnsemblPlants:PGSC0003DMT400008178	EnsemblPlantsGene:PGSC0003DMG402003154	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:DUF3523
ncoils:Coil	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	PFAM:PF12037	PGSC:PGSC0003DMG402003154	UniParc:UPI0002961EF1
UniProt:M0ZU77	MapMan:35.2	:	:	:	:

Description

Proteasome-activating nucleotidase [Source:PGSC_GENE;Acc:PGSC0003DMG402003154]

Coordinates

chr3:+:46766291..46766914

Molecular Weight (calculated)

13232.7 Da

IEP (calculated)

6.275

GRAVY (calculated)

-0.630

Length

115 amino acids

Sequence
(BLAST)

001: MQEESGMRQE AARRATEEQI QAQRRQTERE KAEIERETIR VRAMAEAEGR AHEAKLAEDV NRRILVDRAN AEREKWIAAI NTTFEHIGGS SLTTILKLAF
101: YGYPCIEFFL IGSHV

Best Arabidopsis Sequence Match ( AT3G03060.1 )
(BLAST)

001: MAQKCAIGLI SALAASASLA KSKVASADGP FNLSGFSTSA NPQQQASPPP PSLAGEESSA PPRARNDNPR TSSGGFDPEA LERGAKALKE INHSSYAKKV
101: FESIKQQEET KQTEFATKAQ EFKAMQAQAE TERHKVIYDE QKKLAQHQAQ TKSQMARYED DLARKRMQAE NEFHRTRNQE LVKMQEDSAI RQEQARRATE
201: EQIQAQRRQT EREKAEIERE TIRVKAIAEA EGRAHEARLA EDVNRRMLVD RANAEREKWV AAINTTFDHI GGGLRAILTD QNKLIVAVGG VTALAAGIYT
301: TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSLSRVM STLRGKESAS KNGKRFGDVI LHPPLAKRIE HLATSTANTK LHQAPFRNIL LHGPPGTGKT
401: MAARELARKS GLDYALMTGG DVAPLGAQAV TKIHELFDWG KKSKRGLLLF IDEADAFLCE RNKTYMSEAQ RSALNALLFR TGDQSKDIVL ALATNRPGDL
501: DSAVADRVDE VLEFPLPGEE ERFKLLNLYL EKYIAEAGPS KPGLFDRLFK KEQQKIEIKG VTEELLKEAA AKTEGFSGRE IAKLMASVQA AVYGSEDCVL
601: DSMLFREVVD YKVAEHQQRR KLAGVDSK

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WVF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.