CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051572_P001	Maize	mitochondrion	93.06	93.06
Zm00001d017783_P002	Maize	mitochondrion	91.41	89.34
Os02t0706500-01	Rice	mitochondrion	75.21	73.86
PGSC0003DMT400040085	Potato	extracellular	42.98	73.03
TraesCS6A01G273800.1	Wheat	mitochondrion	72.89	72.41
TraesCS6D01G253600.1	Wheat	mitochondrion	72.89	72.3
TraesCS6B01G300900.1	Wheat	mitochondrion	72.56	71.97
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	68.1	65.5
CDY36475	Canola	plastid	67.27	64.6
VIT_04s0023g01900.t01	Wine grape	plastid	66.12	63.8
CDY64607	Canola	plastid	62.81	63.65
Bra011692.1-P	Field mustard	plastid	62.98	63.61
CDX69234	Canola	cytosol, plastid	62.81	63.55
AT2G18330.1	Thale cress	plastid	66.78	63.52
HORVU6Hr1G069110.2	Barley	plastid	66.78	63.03
AT4G36580.1	Thale cress	plastid	65.62	62.82
Solyc02g062700.2.1	Tomato	nucleus	66.45	62.81
KRH28685	Soybean	nucleus	65.45	62.76
KXG38569	Sorghum	cytosol	5.79	62.5
KRH76781	Soybean	nucleus	64.63	62.46
CDY30315	Canola	plastid	66.61	60.88
Bra037225.1-P	Field mustard	plastid	66.94	56.09
CDY51218	Canola	plastid	66.28	55.93
Bra024472.1-P	Field mustard	plastid	37.52	54.57
EES07415	Sorghum	plastid	57.69	53.77
CDY29229	Canola	mitochondrion	31.41	51.77
PGSC0003DMT400008178	Potato	cytosol, mitochondrion, peroxisome	8.76	46.09
CDX96098	Canola	mitochondrion	16.2	41.18
Bra028131.1-P	Field mustard	nucleus	17.19	35.86
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	14.21	30.94
KXG30792	Sorghum	mitochondrion	13.72	14.14

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:8073856	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
UniProt:C5Y0B1	ncoils:Coil	InterPro:DUF3523	EnsemblPlants:EES07394	ProteinID:EES07394	ProteinID:EES07394.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674	PANTHER:PTHR23075
PANTHER:PTHR23075:SF3	SMART:SM00382	EnsemblPlantsGene:SORBI_3004G266900	SUPFAM:SSF52540	UniParc:UPI0001A85C32	RefSeq:XP_002454418.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:61127412..61135515

Molecular Weight (calculated)

67856.7 Da

IEP (calculated)

9.969

GRAVY (calculated)

-0.535

Length

605 amino acids

Sequence
(BLAST)

001: MLRRLRLRSP GRAASAVAGA AAAMASLTNV AYADGLFRRQ SPPSNPGDED NLGASAFGRD PETLERMARA LRQINNSPLA KQVFELMRKQ EETRLTELEA
101: EKVLHAVHER LRDMERMQKK AEDYRNSLQQ EAQAKAQALR YEDELARKRM QTEHAAQRRQ DAELVKMQEA SALRREEARR GTEQKILEEM IRTEKEKAEI
201: DQELNRAKAL AEANARVHEE KESEEVTKRM MLERMKGEKE KWLSAINTTF SHIEGGFKAL LTDRSKLIMG IGGVTALAAG VYTTREGARV TWSYINRILG
301: QPSLIRESSM PKFPLPMSRL LKPSSASLSG GAGFENVILH PSLKRRIEHL ARATANTKSH GAPFRNMLFY GPPGTGKTLV AREMARKSGL DYAMMTGGDV
401: APLGSEAVTK IHQIFDWAKK SKKGMLVFID EADAFLCERN STHMSEAQRS ALNALLFRTG DQSRDIVLVL ATNRPGDLDA AITDRIDEVI EFPLPGEEER
501: FQLLKLYLNQ YILKEEGKGS SWGALFKKQQ RKIQVNGISD DLLRKAARKI DGFSGREIAK LVASVQAAVY GRPDCILDPQ LFSEVVDYKV TEHHQRIKLA
601: SEGMV

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.