CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017988_P002	Maize	mitochondrion	91.48	89.2
TraesCS6A01G311400.1	Wheat	mitochondrion, plastid	75.64	75.0
TraesCS6D01G290700.1	Wheat	mitochondrion	74.79	74.03
HORVU6Hr1G076750.17	Barley	mitochondrion	73.08	72.71
Os02t0740300-01	Rice	mitochondrion	74.45	71.52
Solyc02g036330.2.1	Tomato	cytosol	23.34	67.82
TraesCS6B01G341600.1	Wheat	cytosol, plastid	72.74	66.61
VIT_10s0116g00260.t01	Wine grape	cytosol	26.92	62.95
PGSC0003DMT400055268	Potato	cytosol	37.31	62.75
GSMUA_Achr7P19880_001	Banana	cytosol	40.2	62.11
GSMUA_Achr10P...	Banana	cytosol	41.91	61.96
KRH11495	Soybean	mitochondrion	52.81	54.1
KRH36514	Soybean	cytosol	7.5	53.66
VIT_10s0116g00330.t01	Wine grape	mitochondrion	50.43	49.66
Bra029485.1-P	Field mustard	mitochondrion	49.4	49.57
CDY16678	Canola	cytosol	9.54	49.12
AT4G04180.1	Thale cress	mitochondrion	48.89	47.83
CDX94544	Canola	mitochondrion	48.55	46.8
CDX83073	Canola	endoplasmic reticulum	26.75	41.32
Bra029941.1-P	Field mustard	cytosol	14.14	40.49
Solyc02g036340.2.1	Tomato	nucleus	21.29	33.16
KRH63149	Soybean	cytosol	7.67	32.61
CDY71527	Canola	mitochondrion	13.12	29.28
CDX68520	Canola	cytosol	7.67	29.22
KXG38569	Sorghum	cytosol	2.39	25.0
PGSC0003DMT400055267	Potato	mitochondrion	7.33	19.11
EES07415	Sorghum	plastid	15.67	14.18
EES07394	Sorghum	mitochondrion	14.14	13.72

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A194YRH3	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlants:KXG30792	ProteinID:KXG30792
ProteinID:KXG30792.1	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23073	PANTHER:PTHR23073:SF29
SMART:SM00382	EnsemblPlantsGene:SORBI_3004G243600	SUPFAM:SSF52540	SignalP:SignalP-noTM	UniParc:UPI0003C66419	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:59117788..59123596

Molecular Weight (calculated)

64186.8 Da

IEP (calculated)

8.128

GRAVY (calculated)

-0.318

Length

587 amino acids

Sequence
(BLAST)

001: MAMLLRRRLP LLRLLRLLHT ESAASTSLSS TPPPPLQKPH AAVVGLGSRR LRFPNATPAE SVSRASKSSS AAAYLAIGAA AALASLPVAY ADSNEQGAVD
101: KVASADPAEG EDLARKERKR ILELVQSRGM QRGSYPQFDV AVKGQKLVVK FNMPSTCNVS HLIVDLVTHI GHEAEQLGGG SEVLVRAWDS PAARQITLNP
201: PKKTSTGDHG EDGLCVLIFE PLVGSDYSEI EFIKRGSFSL KELEALVSAL KIAGEKNVKG SSGKNTPRKG NGQRSKHVPS LEKTVSDLDA MGVRVYGFDE
301: TSSVPMDGTV IWENLAGYEP QKREIEDTIL LALQSPEVYD DIARGTRCKF ETNRPRAVLF EGPPGTGKTS SARVIAKQAG VPLLYVPLEV VMSKYYGESE
401: RLLGSVFSLA NDLPEGGIIF LDEVDSFAIA RDSEMHEATR RILSVILRQI DGFEQDRRVV VIAATNRKED LDPALISRFD SIICFGLPDQ QTRAEIAAQY
501: AKHLTRSELV QFSLATEEMS GRDIRDVCQQ AERHWASKLI RGQVPKDEKG EPSLPPIDEY LSCAEQRRKS LPDRTKRTSR SPALKLA

Best Arabidopsis Sequence Match ( AT4G04180.1 )
(BLAST)

001: MAILDKLFRA SRAWRGSLSH SKSMVPSQSP RARELRRCFH HGNFEQSNSK VNQVLRSCST LNDSPYFSMA PAVLGALFSV GVIGVAYAES DEANNDKSSA
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA VRGQKITLKF QVPSTCEVAQ LISNIGSQLG VKVSDRTGGS DMLLRAWDNP
201: VAWQITLRSV ENKKKLGESE DDSDDDLCIL IFGSLLTSDK VEVEFIKKGS LTTEELEAFV SALGVAGTKA GQNKGSGSRG STRDSSTDKS ISQLESMGVR
301: IYGVNKPLGD DSMDEISWDN IAGYDQQKRE IEDTILMALH SPEVYDDIVR GTRSKFESNR PRAVLFEGPP GTGKTSCARV IANQAGIPLL YVPLEAVMSK
401: YYGESERLLG AVFSQANELP DGAIIFLDEI DAFAISRDSE MHEATRRVLS VLLRQIDGFE QEKKVVVIAA TNRKQDLDPA LISRFDSMIM FDLPDLQTRQ
501: EIIAQYAKQL SKPELVQLAQ ATEAMSGRDI RDVCQGAERT WASKLIRRAK AGGEEQKITL PPIQEYLESA EARRKSLRSV TEQKEQKFAA RSKKPLLDFE

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G04180]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.