Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g036330.2.1 | Tomato | cytosol | 48.25 | 27.23 |
| VIT_10s0116g00260.t01 | Wine grape | cytosol | 46.49 | 21.12 |
| Bra029485.1-P | Field mustard | mitochondrion | 89.47 | 17.44 |
| PGSC0003DMT400055268 | Potato | cytosol | 48.25 | 15.76 |
| GSMUA_Achr7P19880_001 | Banana | cytosol | 50.88 | 15.26 |
| CDX94544 | Canola | mitochondrion | 80.7 | 15.11 |
| AT4G04180.1 | Thale cress | mitochondrion | 69.3 | 13.17 |
| GSMUA_Achr10P... | Banana | cytosol | 42.98 | 12.34 |
| KRH11495 | Soybean | mitochondrion | 52.63 | 10.47 |
| KXG30792 | Sorghum | mitochondrion | 49.12 | 9.54 |
| HORVU6Hr1G076750.17 | Barley | mitochondrion | 47.37 | 9.15 |
| TraesCS6A01G311400.1 | Wheat | mitochondrion, plastid | 46.49 | 8.95 |
| TraesCS6D01G290700.1 | Wheat | mitochondrion | 46.49 | 8.94 |
| VIT_10s0116g00330.t01 | Wine grape | mitochondrion | 46.49 | 8.89 |
| Os02t0740300-01 | Rice | mitochondrion | 46.49 | 8.67 |
| TraesCS6B01G341600.1 | Wheat | cytosol, plastid | 47.37 | 8.42 |
| CDY29229 | Canola | mitochondrion | 18.42 | 5.72 |
| CDY23468 | Canola | cytosol | 16.67 | 4.97 |
| KRH36514 | Soybean | cytosol | 3.51 | 4.88 |
| CDY16967 | Canola | cytosol | 14.91 | 4.39 |
| CDY16679 | Canola | mitochondrion | 6.14 | 3.59 |
| CDY36475 | Canola | plastid | 18.42 | 3.33 |
| CDY30315 | Canola | plastid | 19.3 | 3.32 |
| CDY51218 | Canola | plastid | 20.18 | 3.21 |
| CDY43155 | Canola | plastid | 15.79 | 3.1 |
| CDY28733 | Canola | plastid | 16.67 | 3.03 |
| CDY64607 | Canola | plastid | 15.79 | 3.02 |
| CDX69234 | Canola | cytosol, plastid | 15.79 | 3.01 |
| CDY49920 | Canola | plastid | 16.67 | 2.97 |
| CDX85480 | Canola | plastid | 14.91 | 2.74 |
| CDY38078 | Canola | plastid | 14.91 | 2.73 |
| CDX69409 | Canola | plastid | 14.91 | 2.66 |
| KRH63149 | Soybean | cytosol | 2.63 | 2.17 |
| CDX68521 | Canola | mitochondrion | 1.75 | 1.38 |
| CDX83073 | Canola | endoplasmic reticulum | 4.39 | 1.32 |
| CDY71527 | Canola | mitochondrion | 1.75 | 0.76 |
| CDX68520 | Canola | cytosol | 0.88 | 0.65 |
| CDY23469 | Canola | plastid | 0.88 | 0.58 |
| CDY16968 | Canola | cytosol, extracellular, plastid | 0.0 | 0.0 |
| CDX96098 | Canola | mitochondrion | 0.0 | 0.0 |
| PGSC0003DMT400055267 | Potato | mitochondrion | 0.0 | 0.0 |
| Solyc02g036340.2.1 | Tomato | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY16678 | EnsemblPlantsGene:GSBRNA2T00094527001 | Gene3D:1.10.8.60 | ncoils:Coil | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF29 |
| ProteinID:CDY16678 | ProteinID:CDY16678.1 | UniParc:UPI0004EF1A7A | UniProt:A0A078FW68 | MapMan:35.2 | : |
Description
BnaA09g20560DBnaA09g20560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW68]
Coordinates
chrLK032066:-:488070..488683
Molecular Weight (calculated)
12961.6 Da
IEP (calculated)
9.180
GRAVY (calculated)
-0.595
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMFGLPDLQ TRQEIIAQYA KQLSKPELVQ LAHATEAMSG RDIRDVCQGA ERTWASKLIR RAKADGVEQQ QVTLPPIQEY LESAEARRKA LRSVAEQREQ
101: NLAARSKKPL LDFE
101: NLAARSKKPL LDFE
001: MAILDKLFRA SRAWRGSLSH SKSMVPSQSP RARELRRCFH HGNFEQSNSK VNQVLRSCST LNDSPYFSMA PAVLGALFSV GVIGVAYAES DEANNDKSSA
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA ITLKFQVPST CEVAQLISNI GSQLGVKVSD RTGGSDMLLR AWDNPVAWQI
201: TLRSVENKKK LGESEDDSDD DLCILIFGSL LTSDKVEVEF IKKGSLTTEE LEAFVSALGV AGTKAGQNKG SGSRGSTRDS STDKSISQLE SMGVRIYGVN
301: KPLGDDSMDE ISWDNIAGYD QQKREIEDTI LMALHSPEVY DDIVRGTRSK FESNRPRAVL FEGPPGTGKT SCARVIANQA GIPLLYVPLE AVMSKYYGES
401: ERLLGAVFSQ ANELPDGAII FLDEIDAFAI SRDSEMHEAT RRVLSVLLRQ IDGFEQEKKV VVIAATNRKQ DLDPALISRF DSMIMFDLPD LQTRQEIIAQ
501: YAKQLSKPEL VQLAQATEAM SGRDIRDVCQ GAERTWASKL IRRAKAGGEE QKITLPPIQE YLESAEARRK SLRSVTEQKE QKFAARSKKP LLDFE
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA ITLKFQVPST CEVAQLISNI GSQLGVKVSD RTGGSDMLLR AWDNPVAWQI
201: TLRSVENKKK LGESEDDSDD DLCILIFGSL LTSDKVEVEF IKKGSLTTEE LEAFVSALGV AGTKAGQNKG SGSRGSTRDS STDKSISQLE SMGVRIYGVN
301: KPLGDDSMDE ISWDNIAGYD QQKREIEDTI LMALHSPEVY DDIVRGTRSK FESNRPRAVL FEGPPGTGKT SCARVIANQA GIPLLYVPLE AVMSKYYGES
401: ERLLGAVFSQ ANELPDGAII FLDEIDAFAI SRDSEMHEAT RRVLSVLLRQ IDGFEQEKKV VVIAATNRKQ DLDPALISRF DSMIMFDLPD LQTRQEIIAQ
501: YAKQLSKPEL VQLAQATEAM SGRDIRDVCQ GAERTWASKL IRRAKAGGEE QKITLPPIQE YLESAEARRK SLRSVTEQKE QKFAARSKKP LLDFE
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G04180]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.