CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16967	Canola	cytosol	60.16	99.48
Bra008582.1-P	Field mustard	plastid	89.53	98.28
CDX85480	Canola	plastid	87.97	90.81
CDY38078	Canola	plastid	87.81	90.21
AT5G16930.1	Thale cress	plastid	90.16	89.6
CDY23468	Canola	cytosol	53.44	89.53
CDY16968	Canola	cytosol, extracellular, plastid	31.72	86.38
CDY43155	Canola	plastid	73.75	81.38
CDY49920	Canola	plastid	80.31	80.44
VIT_16s0039g02110.t01	Wine grape	plasma membrane	78.12	79.24
CDY28733	Canola	plastid	77.34	78.82
Solyc03g097020.2.1	Tomato	nucleus	76.25	77.22
KRH24032	Soybean	mitochondrion, nucleus	73.28	76.01
KRH29004	Soybean	nucleus	73.59	75.97
TraesCS6B01G294300.1	Wheat	peroxisome	62.5	74.91
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	59.53	74.71
GSMUA_Achr4P17050_001	Banana	vacuole	70.0	73.32
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	65.0	71.97
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	67.81	68.24
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	67.66	68.08
Os02t0697600-01	Rice	mitochondrion	67.34	67.34
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	66.72	67.24
EES07415	Sorghum	plastid	67.81	66.87
CDY23469	Canola	plastid	17.81	65.9
Zm00001d017707_P003	Maize	plastid	66.09	65.68
Zm00001d051535_P001	Maize	plastid	65.94	64.53
CDY64607	Canola	plastid	59.06	63.32
PGSC0003DMT400008177	Potato	cytosol	10.47	63.21
CDY36475	Canola	plastid	61.72	62.7
CDX69234	Canola	cytosol, plastid	58.44	62.54
CDY30315	Canola	plastid	60.62	58.61
CDY51218	Canola	plastid	60.47	53.97
CDY29229	Canola	mitochondrion	28.12	49.05
CDX96098	Canola	mitochondrion	17.5	47.06
CDX68520	Canola	cytosol	4.69	19.48
CDX94544	Canola	mitochondrion	16.56	17.41
CDY16679	Canola	mitochondrion	4.69	15.38
CDY16678	Canola	cytosol	2.66	14.91
CDY71527	Canola	mitochondrion	5.78	14.07
CDX68521	Canola	mitochondrion	3.12	13.79
CDX83073	Canola	endoplasmic reticulum	8.12	13.68

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	GO:A0A078BZM5	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlants:CDX69409
ProteinID:CDX69409	ProteinID:CDX69409.1	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00135377001	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037
PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	SMART:SM00382	SUPFAM:SSF52540	SignalP:SignalP-noTM	UniParc:UPI0004EE4024
SEG:seg	:	:	:	:	:

Description

BnaA10g17580D

Coordinates

chrLK031790:-:93141..96369

Molecular Weight (calculated)

70590.0 Da

IEP (calculated)

10.020

GRAVY (calculated)

-0.606

Length

640 amino acids

Sequence
(BLAST)

001: MAQKCAIGLM SALAAAASLS KSNIASADGP LNFSAFSTST PQQQQGSTPP TPGSAKDSSV PGEESDAPPR IRNDNPRTTS AGFDPEALER GAKALKGINN
101: SAHAKKVFES IKTQEETRQA EFTAKAQEFK ALQSQAEAER QRVIYEEQKK LAQHQAQTKA QMARYEDELA RKRMQACNEA QRTRNQELVK MQEESSIRRE
201: VARRATEEEI QAQRRQTERE KAEIERETIR VKAMAEAEGR ARESKLSEDV NRRMLVDRAN AEREKWVSAI NTTFDHIGGG LRMILTDQNK LVVAVGGITA
301: LAAGIYTTRE GAKVIWSYVD RVLGQPSLIR ESSRGKYPWS GSLSRVFSTL RGGGKEAASK NGKGFGDVIL HPSLQKRIEQ LASATANTKS HQAPFRNMLF
401: YGPPGTGKTM AARELARKSG LDYALMTGGD VAPLGAQAVT KIHQLFDWSK KSKRGLLLFI DEADAFLCER NKTYMSEAQR SALNALLFRT GDQSKDIVLA
501: LATNRPGDLD SAVADRVDET LEFPLPGEEE RFKLLNLYLD KYITKTNLKK PGLLQSLFKK DQQKIEVKGV TEDLLKEAAA KTKGFSGREI AKLMASVQAA
601: VYGSADCLLD ANLFREVIDY KVAEHLQRKK LAGTDTGNKK

Best Arabidopsis Sequence Match ( AT5G16930.1 )
(BLAST)

001: MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXI0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.