Factsheet for GSMUA_Achr4P17050_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P03650_001	Banana	cytosol	65.47	89.09
CDY23468	Canola	cytosol	51.23	81.94
CDY16967	Canola	cytosol	50.08	79.07
VIT_16s0039g02110.t01	Wine grape	plasma membrane	79.05	76.55
CDY43155	Canola	plastid	71.52	75.34
Bra032021.1-P	Field mustard	plastid	71.19	75.0
Bra021376.1-P	Field mustard	plastid	72.34	74.92
KRH29004	Soybean	nucleus	75.78	74.68
KRH24032	Soybean	mitochondrion, nucleus	75.29	74.55
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	61.54	73.73
TraesCS6B01G294300.1	Wheat	peroxisome	64.16	73.41
Solyc03g097020.2.1	Tomato	nucleus	75.61	73.1
Bra008582.1-P	Field mustard	plastid	68.74	72.04
AT3G03060.1	Thale cress	plastid	73.32	71.34
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	67.27	71.11
CDY28733	Canola	plastid	73.0	71.02
CDY49920	Canola	plastid	73.32	70.11
CDX69409	Canola	plastid	73.32	70.0
EES07415	Sorghum	plastid	73.0	68.72
AT5G16930.1	Thale cress	plastid	72.18	68.48
Zm00001d017707_P003	Maize	plastid	71.69	68.01
Os02t0697600-01	Rice	mitochondrion	71.19	67.97
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	70.21	67.45
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	70.21	67.45
CDX85480	Canola	plastid	68.41	67.42
Zm00001d051535_P001	Maize	plastid	71.85	67.13
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	69.39	66.77
CDY38078	Canola	plastid	67.59	66.29
Bra023590.1-P	Field mustard	plastid	68.25	65.77
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	64.65	62.8
PGSC0003DMT400008177	Potato	cytosol	10.64	61.32
GSMUA_Achr5P03640_001	Banana	extracellular	16.53	60.12
CDY16968	Canola	cytosol, extracellular, plastid	18.49	48.09
CDY23469	Canola	plastid	12.93	45.66
GSMUA_Achr7P19880_001	Banana	cytosol	13.26	21.32
GSMUA_Achr10P...	Banana	cytosol	12.44	19.14
GSMUA_Achr7P19890_001	Banana	cytoskeleton, cytosol, peroxisome	3.93	15.69

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil
InterPro:DUF3523	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:GSMUA_Achr4G17050_001	EnsemblPlants:GSMUA_Achr4P17050_001	EnsemblPlants:GSMUA_Achr4T17050_001	UniProt:M0SPL9
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3
SMART:SM00382	SUPFAM:SSF52540	SignalP:SignalP-noTM	UniParc:UPI000296E118	SEG:seg	:

Description

Putative ATPase family AAA domain-containing protein 3-B [Source:GMGC_GENE;Acc:GSMUA_Achr4G17050_001]

Coordinates

chr4:+:15872454..15879008

Molecular Weight (calculated)

67831.7 Da

IEP (calculated)

9.612

GRAVY (calculated)

-0.518

Length

611 amino acids

Sequence
(BLAST)

001: MATLRSVMLA SAVASAALAV EHAYADGAPF NFSPFNSYTS REAPPAQTSA APGPPAADVP PAEVARVRND NPRTTAAGFD PEALERGAKA LRKINSSPQA
101: KKVFELMRKQ EETKQVELAA KKAEFQAMQA QHETDRQRVI YEEQKKLAEH ESQRARNQEL VKMQEESSIR QEQIRRATEE QIQAQRRQTE REKAELERET
201: IRVRALAEAE GRAHEAKLAE DVNRRMLIER ANAEREKWIS AINTTFEHIG GGLRAILTDQ NKLVIAVGGV TAVAAGIYTT REGARVVWGY VDRILGQPSL
301: IRESSRGKYP WSGFFSRMVS SASNKMMKGN DAGKKVTGFG DVILNPSLQK RIEQLASATA NTKIHQAPFR NMLFYGPPGT GKTMAARELA HKSGLDYALM
401: TGGDVAPLGS QAVTKIHQLF DWAKKSKRGL LLFIDEADAF LCERNKTYMS EAQRSALNAL LFRTGDQSKD IVLVLATNRP GDLDSAVADR IDEVLEFPLP
501: EEEERYKLLK LYLDKYIARA GDSKSSWFGL YRPQQQKIVI KGISDDVIRE AAAKTEGFSG REIAKLMASV QAAVYGSKDC ELGSDLFREV VDYKVAEHQQ
601: RRKLTGADQS V

Best Arabidopsis Sequence Match ( AT3G03060.1 )
(BLAST)

001: MAQKCAIGLI SALAASASLA KSKVASADGP FNLSGFSTSA NPQQQASPPP PSLAGEESSA PPRARNDNPR TSSGGFDPEA LERGAKALKE INHSSYAKKV
101: FESIKQQEET KQTEFATKAQ EFKAMQAQAE TERHKVIYDE QKKLAQHQAQ TKSQMARYED DLARKRMQAE NEFHRTRNQE LVKMQEDSAI RQEQARRATE
201: EQIQAQRRQT EREKAEIERE TIRVKAIAEA EGRAHEARLA EDVNRRMLVD RANAEREKWV AAINTTFDHI GGGLRAILTD QNKLIVAVGG VTALAAGIYT
301: TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSLSRVM STLRGKESAS KNGKRFGDVI LHPPLAKRIE HLATSTANTK LHQAPFRNIL LHGPPGTGKT
401: MAARELARKS GLDYALMTGG DVAPLGAQAV TKIHELFDWG KKSKRGLLLF IDEADAFLCE RNKTYMSEAQ RSALNALLFR TGDQSKDIVL ALATNRPGDL
501: DSAVADRVDE VLEFPLPGEE ERFKLLNLYL EKYIAEAGPS KPGLFDRLFK KEQQKIEIKG VTEELLKEAA AKTEGFSGRE IAKLMASVQA AVYGSEDCVL
601: DSMLFREVVD YKVAEHQQRR KLAGVDSK

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WVF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.