Factsheet for GSMUA_Achr10P31180_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g036330.2.1	Tomato	cytosol	32.24	63.37
GSMUA_Achr7P19880_001	Banana	cytosol	59.19	61.84
PGSC0003DMT400055268	Potato	cytosol	52.14	59.31
VIT_10s0116g00260.t01	Wine grape	cytosol	36.52	57.77
KRH36514	Soybean	cytosol	10.58	51.22
CDY16678	Canola	cytosol	12.34	42.98
KXG30792	Sorghum	mitochondrion	61.96	41.91
KRH11495	Soybean	mitochondrion	57.68	39.97
Zm00001d017988_P002	Maize	mitochondrion	60.45	39.87
TraesCS6D01G290700.1	Wheat	mitochondrion	59.19	39.63
TraesCS6A01G311400.1	Wheat	mitochondrion, plastid	58.94	39.53
HORVU6Hr1G076750.17	Barley	mitochondrion	58.69	39.49
Os02t0740300-01	Rice	mitochondrion	58.69	38.13
Bra029941.1-P	Field mustard	cytosol	19.4	37.56
TraesCS6B01G341600.1	Wheat	cytosol, plastid	59.19	36.66
Bra029485.1-P	Field mustard	mitochondrion	53.9	36.58
VIT_10s0116g00330.t01	Wine grape	mitochondrion	54.91	36.58
AT4G04180.1	Thale cress	mitochondrion	54.41	36.0
CDX94544	Canola	mitochondrion	54.66	35.63
CDX83073	Canola	endoplasmic reticulum	27.71	28.95
CDX68520	Canola	cytosol	9.82	25.32
Solyc02g036340.2.1	Tomato	nucleus	17.63	18.57
GSMUA_Achr5P03650_001	Banana	cytosol	19.65	17.37
GSMUA_Achr7P19890_001	Banana	cytoskeleton, cytosol, peroxisome	5.04	13.07
GSMUA_Achr4P17050_001	Banana	vacuole	19.14	12.44
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	18.89	11.92
CDY71527	Canola	mitochondrion	7.81	11.79
KRH63149	Soybean	cytosol	4.03	11.59
PGSC0003DMT400055267	Potato	mitochondrion	1.26	2.22
GSMUA_Achr5P03640_001	Banana	extracellular	0.5	1.19

Protein Annotations

EnsemblPlants:GSMUA_Achr10P31180_001	EnsemblPlants:GSMUA_Achr10T31180_001	EnsemblPlantsGene:GSMUA_Achr10G31180_001	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase
PANTHER:PTHR23073	PANTHER:PTHR23073:SF29	PFAM:PF00004	ScanProsite:PS00674	SEG:seg	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI000294AD9E	UniProt:M0RMZ2	MapMan:35.1	:	:

Description

AAA-type ATPase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G31180_001]

Coordinates

chr10:-:33341396..33351989

Molecular Weight (calculated)

43751.6 Da

IEP (calculated)

6.903

GRAVY (calculated)

-0.224

Length

397 amino acids

Sequence
(BLAST)

001: MLSAAGWRIA LNPSEKSGVS DATNEGGLSI LIISSLHDSD FCVIKFIKRG MYSFRELDAM VSALKLAGEQ ANIKKSSGSY TKAYKRGDIY PEKTVSALEA
101: MGVVVYGLDE TSGISLDGTI SWENMAGYDD QKREIEDTIL LALQSPEVYD EVARGTRCKF ETNRPRAVLF EGPPGTGKTT TARVIAKQAG VPLLYVPLEV
201: IMSKCYGESE RLLAKVFSLA NELPSGAIIF LDEVDSFAAS RCNRMHEATR RILSVILRQI DGFEKEKQVI VIAATNRKKD LDPALISRFD SMISFSLPDQ
301: QTREGIAAQY AKHLLKTEII LLAAATDGMS GRDIRDVCEQ TERHWASKLI RGQAPNDATR RTTKLPPIEE YINSAEQRRE ALLLDISGGN KCPKSCI

Best Arabidopsis Sequence Match ( AT4G04180.2 )
(BLAST)

001: MAILDKLFRA SRAWRGSLSH SKSMVPSQSP RARELRRCFH HGNFEQSNSK VNQVLRSCST LNDSPYFSMA PAVLGALFSV GVIGVAYAES DEANNDKSSA
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA ITLKFQVPST CEVAQLISNI GSQLGVKVSD RTGGSDMLLR AWDNPVAWQI
201: TLRSVENKKK LGESEDDSDD DLCILIFGSL LTSDKVEVEF IKKGSLTTEE LEAFVSALGV AGTKAGQNKG SGSRGSTRDS STDKSISQLE SMGVRIYGVN
301: KPLGDDSMDE ISWDNIAGYD QQKREIEDTI LMALHSPEVY DDIVRGTRSK FESNRPRAVL FEGPPGTGKT SCARVIANQA GIPLLYVPLE AVMSKYYGES
401: ERLLGAVFSQ ANELPDGAII FLDEIDAFAI SRDSEMHEAT RRVLSVLLRQ IDGFEQEKKV VVIAATNRKQ DLDPALISRF DSMIMFDLPD LQTRQEIIAQ
501: YAKQLSKPEL VQLAQATEAM SGRDIRDVCQ GAERTWASKL IRRAKAGGEE QKITLPPIQE YLESAEARRK SLRSVTEQKE QKFAARSKKP LLDFE

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G04180]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.