Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P17050_001 | Banana | vacuole | 89.09 | 65.47 |
| GSMUA_Achr10P... | Banana | mitochondrion, plasma membrane | 71.49 | 51.03 |
| GSMUA_Achr7P19880_001 | Banana | cytosol | 17.15 | 20.26 |
| GSMUA_Achr10P... | Banana | cytosol | 17.37 | 19.65 |
| GSMUA_Achr7P19890_001 | Banana | cytoskeleton, cytosol, peroxisome | 4.45 | 13.07 |
| GSMUA_Achr5P03640_001 | Banana | extracellular | 0.67 | 1.79 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.2 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | ncoils:Coil | InterPro:DUF3523 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0007005 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | EnsemblPlantsGene:GSMUA_Achr5G03650_001 | EnsemblPlants:GSMUA_Achr5P03650_001 | EnsemblPlants:GSMUA_Achr5T03650_001 | UniProt:M0SVE4 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | PFAM:PF12037 | PANTHER:PTHR23075 | PANTHER:PTHR23075:SF3 | SMART:SM00382 | SUPFAM:SSF52540 |
| UniParc:UPI0002964A46 | SEG:seg | : | : | : | : |
Description
Putative ATPase family AAA domain-containing protein 3-B [Source:GMGC_GENE;Acc:GSMUA_Achr5G03650_001]
Coordinates
chr5:+:2543323..2548689
Molecular Weight (calculated)
49908.4 Da
IEP (calculated)
9.723
GRAVY (calculated)
-0.483
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEESSIRQE QIRRATEEQI QAQRRQTEKE KAEIERETIR VRALAEAEGR AHEAKLAEEV NRRMLVERAN AERDKWISAI NTTFDHIGGG LRAILTDQNK
101: LIVAVGGVTA LAAGIYTTRE GARVVWGYVD RILGQPSLIR ESSRGKYPWS GFFARAFSST SNKMIRGNNS GKNENGFGDV ILNPSLQKRV EQLASATANT
201: KAHQAPFRNM LFYGPPGTGK TMAARELARQ SGLDYALMTG GDVAPLGSQA VTKIHQLFDW AKKSRKGLLL FVDEADAFLC ERNKTYMSEA QRSALNALLF
301: RTGDQSKDIV LALATNRPGD LDSAVADRID EVLEFPLPRE EERFKLIKLY MDKYIAKAGE SKSSWFSLFR PQPQRIEIKG ISDDVIREAA AKTEGFSGRE
401: IAKLMASVQA AVYGSKDCEL TSGLFREVVD YKAAEHQQRR KLAAAEGGA
101: LIVAVGGVTA LAAGIYTTRE GARVVWGYVD RILGQPSLIR ESSRGKYPWS GFFARAFSST SNKMIRGNNS GKNENGFGDV ILNPSLQKRV EQLASATANT
201: KAHQAPFRNM LFYGPPGTGK TMAARELARQ SGLDYALMTG GDVAPLGSQA VTKIHQLFDW AKKSRKGLLL FVDEADAFLC ERNKTYMSEA QRSALNALLF
301: RTGDQSKDIV LALATNRPGD LDSAVADRID EVLEFPLPRE EERFKLIKLY MDKYIAKAGE SKSSWFSLFR PQPQRIEIKG ISDDVIREAA AKTEGFSGRE
401: IAKLMASVQA AVYGSKDCEL TSGLFREVVD YKAAEHQQRR KLAAAEGGA
001: MAQKCAIGLI SALAASASLA KSKVASADGP FNLSGFSTSA NPQQQASPPP PSLAGEESSA PPRARNDNPR TSSGGFDPEA LERGAKALKE INHSSYAKKV
101: FESIKQQEET KQTEFATKAQ EFKAMQAQAE TERHKVIYDE QKKLAQHQAQ TKSQMARYED DLARKRMQAE NEFHRTRNQE LVKMQEDSAI RQEQARRATE
201: EQIQAQRRQT EREKAEIERE TIRVKAIAEA EGRAHEARLA EDVNRRMLVD RANAEREKWV AAINTTFDHI GGGLRAILTD QNKLIVAVGG VTALAAGIYT
301: TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSLSRVM STLRGKESAS KNGKRFGDVI LHPPLAKRIE HLATSTANTK LHQAPFRNIL LHGPPGTGKT
401: MAARELARKS GLDYALMTGG DVAPLGAQAV TKIHELFDWG KKSKRGLLLF IDEADAFLCE RNKTYMSEAQ RSALNALLFR TGDQSKDIVL ALATNRPGDL
501: DSAVADRVDE VLEFPLPGEE ERFKLLNLYL EKYIAEAGPS KPGLFDRLFK KEQQKIEIKG VTEELLKEAA AKTEGFSGRE IAKLMASVQA AVYGSEDCVL
601: DSMLFREVVD YKVAEHQQRR KLAGVDSK
101: FESIKQQEET KQTEFATKAQ EFKAMQAQAE TERHKVIYDE QKKLAQHQAQ TKSQMARYED DLARKRMQAE NEFHRTRNQE LVKMQEDSAI RQEQARRATE
201: EQIQAQRRQT EREKAEIERE TIRVKAIAEA EGRAHEARLA EDVNRRMLVD RANAEREKWV AAINTTFDHI GGGLRAILTD QNKLIVAVGG VTALAAGIYT
301: TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSLSRVM STLRGKESAS KNGKRFGDVI LHPPLAKRIE HLATSTANTK LHQAPFRNIL LHGPPGTGKT
401: MAARELARKS GLDYALMTGG DVAPLGAQAV TKIHELFDWG KKSKRGLLLF IDEADAFLCE RNKTYMSEAQ RSALNALLFR TGDQSKDIVL ALATNRPGDL
501: DSAVADRVDE VLEFPLPGEE ERFKLLNLYL EKYIAEAGPS KPGLFDRLFK KEQQKIEIKG VTEELLKEAA AKTEGFSGRE IAKLMASVQA AVYGSEDCVL
601: DSMLFREVVD YKVAEHQQRR KLAGVDSK
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WVF7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.