Factsheet for GSMUA_Achr7P19880_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g036330.2.1	Tomato	cytosol	36.32	68.32
VIT_10s0116g00260.t01	Wine grape	cytosol	41.32	62.55
PGSC0003DMT400055268	Potato	cytosol	56.84	61.89
GSMUA_Achr10P...	Banana	cytosol	61.84	59.19
CDY16678	Canola	cytosol	15.26	50.88
KRH36514	Soybean	cytosol	10.79	50.0
KXG30792	Sorghum	mitochondrion	62.11	40.2
HORVU6Hr1G076750.17	Barley	mitochondrion	61.58	39.66
Zm00001d017988_P002	Maize	mitochondrion	61.84	39.04
TraesCS6A01G311400.1	Wheat	mitochondrion, plastid	60.79	39.02
TraesCS6D01G290700.1	Wheat	mitochondrion	60.79	38.95
KRH11495	Soybean	mitochondrion	58.16	38.57
Os02t0740300-01	Rice	mitochondrion	59.47	36.99
Bra029485.1-P	Field mustard	mitochondrion	56.05	36.41
TraesCS6B01G341600.1	Wheat	cytosol, plastid	60.79	36.04
AT4G04180.1	Thale cress	mitochondrion	56.32	35.67
VIT_10s0116g00330.t01	Wine grape	mitochondrion	55.26	35.23
CDX94544	Canola	mitochondrion	55.0	34.32
Bra029941.1-P	Field mustard	cytosol	15.0	27.8
CDX83073	Canola	endoplasmic reticulum	25.0	25.0
GSMUA_Achr5P03650_001	Banana	cytosol	20.26	17.15
GSMUA_Achr7P19890_001	Banana	cytoskeleton, cytosol, peroxisome	6.05	15.03
Solyc02g036340.2.1	Tomato	nucleus	14.47	14.59
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	23.42	14.15
GSMUA_Achr4P17050_001	Banana	vacuole	21.32	13.26
CDX68520	Canola	cytosol	5.0	12.34
KRH63149	Soybean	cytosol	3.95	10.87
GSMUA_Achr5P03640_001	Banana	extracellular	2.63	5.95
PGSC0003DMT400055267	Potato	mitochondrion	2.63	4.44
CDY71527	Canola	mitochondrion	2.89	4.18

Protein Annotations

EnsemblPlants:GSMUA_Achr7P19880_001	EnsemblPlants:GSMUA_Achr7T19880_001	EnsemblPlantsGene:GSMUA_Achr7G19880_001	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
InterPro:P-loop_NTPase	PANTHER:PTHR23073	PANTHER:PTHR23073:SF29	PFAM:PF00004	ScanProsite:PS00674	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI000296548D	UniProt:M0TJ25	MapMan:35.1	:	:

Description

AAA-type ATPase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G19880_001]

Coordinates

chr7:-:22894246..22904417

Molecular Weight (calculated)

42226.1 Da

IEP (calculated)

5.134

GRAVY (calculated)

-0.350

Length

380 amino acids

Sequence
(BLAST)

001: MLFKTLLDSE YCEIEFIKQG SYSFKELEAV VSALKLAGER SNIKKSSGRN PNVFKRNDNY DAKQLASIEK SVSALEGMGV RVYGLDETSS FPWDGTISWE
101: NIAGYDEQKR EIEDTILLAL QSPEIYDEIA RGTRCKFETN RPRAVLFEGP PGTGKTSSAR VIAQQAGIPL LYVPLEVIMS KYYGESERLL GNVFSLANEL
201: PSGAIIFLDE VDSFAVARDS EMHEATRRIL SVILRQIDGF EQEKQVVVIA ATNRKQDLDP ALISRFDSLI SFSLPDQKTR EEIGAQYAKH LLKAELVLLA
301: SATEGMSGRD IRDVCQQAER HWASKRIRGQ APKDAEGSGK LPPIEEYIRS AEQRREAVLA TTIGGGNNSS SFGWKPFALA

Best Arabidopsis Sequence Match ( AT4G04180.1 )
(BLAST)

001: MAILDKLFRA SRAWRGSLSH SKSMVPSQSP RARELRRCFH HGNFEQSNSK VNQVLRSCST LNDSPYFSMA PAVLGALFSV GVIGVAYAES DEANNDKSSA
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA VRGQKITLKF QVPSTCEVAQ LISNIGSQLG VKVSDRTGGS DMLLRAWDNP
201: VAWQITLRSV ENKKKLGESE DDSDDDLCIL IFGSLLTSDK VEVEFIKKGS LTTEELEAFV SALGVAGTKA GQNKGSGSRG STRDSSTDKS ISQLESMGVR
301: IYGVNKPLGD DSMDEISWDN IAGYDQQKRE IEDTILMALH SPEVYDDIVR GTRSKFESNR PRAVLFEGPP GTGKTSCARV IANQAGIPLL YVPLEAVMSK
401: YYGESERLLG AVFSQANELP DGAIIFLDEI DAFAISRDSE MHEATRRVLS VLLRQIDGFE QEKKVVVIAA TNRKQDLDPA LISRFDSMIM FDLPDLQTRQ
501: EIIAQYAKQL SKPELVQLAQ ATEAMSGRDI RDVCQGAERT WASKLIRRAK AGGEEQKITL PPIQEYLESA EARRKSLRSV TEQKEQKFAA RSKKPLLDFE

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G04180]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.