CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055267	Potato	mitochondrion	29.71	18.22
KRH11495	Soybean	mitochondrion	55.8	13.44
Solyc02g036340.2.1	Tomato	nucleus	34.78	12.73
CDY71527	Canola	mitochondrion	21.74	11.41
CDX83073	Canola	endoplasmic reticulum	25.36	9.21
VIT_10s0116g00330.t01	Wine grape	mitochondrion	36.23	8.39
KXG30792	Sorghum	mitochondrion	32.61	7.67
Bra029485.1-P	Field mustard	mitochondrion	31.16	7.35
AT4G04180.1	Thale cress	mitochondrion	31.88	7.33
Os02t0740300-01	Rice	mitochondrion	31.88	7.2
HORVU6Hr1G076750.17	Barley	mitochondrion	29.71	6.95
TraesCS6A01G311400.1	Wheat	mitochondrion, plastid	29.71	6.93
TraesCS6D01G290700.1	Wheat	mitochondrion	29.71	6.91
CDX94544	Canola	mitochondrion	28.99	6.57
TraesCS6B01G341600.1	Wheat	cytosol, plastid	29.71	6.4
GSMUA_Achr10P...	Banana	cytosol	11.59	4.03
GSMUA_Achr7P19880_001	Banana	cytosol	10.87	3.95
Bra029941.1-P	Field mustard	cytosol	5.8	3.9
KRH24032	Soybean	mitochondrion, nucleus	16.67	3.73
KRH36514	Soybean	cytosol	2.17	3.66
KRH29004	Soybean	nucleus	15.94	3.55
KRH28685	Soybean	nucleus	15.22	3.33
KRH76781	Soybean	nucleus	14.49	3.19
VIT_10s0116g00260.t01	Wine grape	cytosol	5.07	2.79
CDY16678	Canola	cytosol	2.17	2.63
PGSC0003DMT400055268	Potato	cytosol	6.52	2.58
Zm00001d007450_P001	Maize	cytosol	1.45	2.47
Solyc02g036330.2.1	Tomato	cytosol	2.9	1.98
CDX68520	Canola	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02002625	EnsemblPlants:KRH63149	EnsemblPlantsGene:GLYMA_04G157800	EntrezGene:100806110	Gene3D:2.60.120.10	InterPro:IPR000595
InterPro:IPR014710	InterPro:RmlC-like_jellyroll	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	ncoils:Coil	PANTHER:PTHR23073
PANTHER:PTHR23073:SF29	PFscan:PS50042	ProteinID:KRH63149	ProteinID:KRH63149.1	SEG:seg	SUPFAM:SSF51206
UniParc:UPI0002964A45	UniProt:K7KKD5	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:38302988..38320311

Molecular Weight (calculated)

15815.0 Da

IEP (calculated)

7.569

GRAVY (calculated)

-0.241

Length

138 amino acids

Sequence
(BLAST)

001: MGFLEAAYVD NGAVDVQESA KKERERIEEL LRSRGIRYGS YPRFTVYVKG QKVSIKFQIP PNCEVSQLIA NLTAHLGTKA EGHGGGSDML LRAWDRLHEE
101: FFLRGEVIME QGNVVDQLYF VCHGVMVVWN YYLRRPFA

Best Arabidopsis Sequence Match ( AT4G04180.1 )
(BLAST)

001: MAILDKLFRA SRAWRGSLSH SKSMVPSQSP RARELRRCFH HGNFEQSNSK VNQVLRSCST LNDSPYFSMA PAVLGALFSV GVIGVAYAES DEANNDKSSA
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA VRGQKITLKF QVPSTCEVAQ LISNIGSQLG VKVSDRTGGS DMLLRAWDNP
201: VAWQITLRSV ENKKKLGESE DDSDDDLCIL IFGSLLTSDK VEVEFIKKGS LTTEELEAFV SALGVAGTKA GQNKGSGSRG STRDSSTDKS ISQLESMGVR
301: IYGVNKPLGD DSMDEISWDN IAGYDQQKRE IEDTILMALH SPEVYDDIVR GTRSKFESNR PRAVLFEGPP GTGKTSCARV IANQAGIPLL YVPLEAVMSK
401: YYGESERLLG AVFSQANELP DGAIIFLDEI DAFAISRDSE MHEATRRVLS VLLRQIDGFE QEKKVVVIAA TNRKQDLDPA LISRFDSMIM FDLPDLQTRQ
501: EIIAQYAKQL SKPELVQLAQ ATEAMSGRDI RDVCQGAERT WASKLIRRAK AGGEEQKITL PPIQEYLESA EARRKSLRSV TEQKEQKFAA RSKKPLLDFE

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G04180]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.