CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68520	Canola	cytosol	24.33	41.56
CDX94544	Canola	mitochondrion	84.79	36.62
CDX83073	Canola	endoplasmic reticulum	44.11	30.53
KRH63149	Soybean	cytosol	11.41	21.74
Solyc02g036340.2.1	Tomato	nucleus	29.66	20.69
PGSC0003DMT400055267	Potato	mitochondrion	14.07	16.44
KRH11495	Soybean	mitochondrion	33.46	15.36
VIT_10s0116g00330.t01	Wine grape	mitochondrion	33.84	14.93
KXG30792	Sorghum	mitochondrion	29.28	13.12
Os02t0740300-01	Rice	mitochondrion	30.04	12.93
HORVU6Hr1G076750.17	Barley	mitochondrion	28.9	12.88
TraesCS6D01G290700.1	Wheat	mitochondrion	28.14	12.48
TraesCS6A01G311400.1	Wheat	mitochondrion, plastid	27.38	12.16
TraesCS6B01G341600.1	Wheat	cytosol, plastid	27.38	11.23
CDY23469	Canola	plastid	7.22	10.98
CDY16968	Canola	cytosol, extracellular, plastid	9.51	10.64
CDX68521	Canola	mitochondrion	5.7	10.34
CDX96098	Canola	mitochondrion	7.98	8.82
GSMUA_Achr10P...	Banana	cytosol	11.79	7.81
CDY38078	Canola	plastid	14.83	6.26
CDX85480	Canola	plastid	14.07	5.97
CDY28733	Canola	plastid	14.07	5.89
CDX69409	Canola	plastid	14.07	5.78
CDY64607	Canola	plastid	12.93	5.7
CDY43155	Canola	plastid	12.55	5.69
CDX69234	Canola	cytosol, plastid	12.93	5.69
CDY49920	Canola	plastid	12.93	5.32
CDY36475	Canola	plastid	12.17	5.08
CDY30315	Canola	plastid	12.55	4.98
CDY51218	Canola	plastid	11.79	4.32
CDY16679	Canola	mitochondrion	3.04	4.1
CDY29229	Canola	mitochondrion	5.7	4.09
PGSC0003DMT400055268	Potato	cytosol	4.94	3.72
GSMUA_Achr7P19880_001	Banana	cytosol	4.18	2.89
KRH36514	Soybean	cytosol	0.76	2.44
VIT_10s0116g00260.t01	Wine grape	cytosol	2.28	2.39
CDY23468	Canola	cytosol	3.04	2.09
CDY16967	Canola	cytosol	3.04	2.07
CDY16678	Canola	cytosol	0.76	1.75
Solyc02g036330.2.1	Tomato	cytosol	1.14	1.49
Zm00001d007450_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY71527	EnsemblPlantsGene:GSBRNA2T00016884001	PANTHER:PTHR23073	PANTHER:PTHR23073:SF29	ProteinID:CDY71527	ProteinID:CDY71527.1
SEG:seg	UniParc:UPI0004EEB7EC	UniProt:A0A078K0U1	MapMan:35.2	:	:

Description

BnaAnng37770DBnaAnng37770D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K0U1]

Coordinates

chrLK046232:-:3..1446

Molecular Weight (calculated)

28784.1 Da

IEP (calculated)

8.821

GRAVY (calculated)

-0.482

Length

263 amino acids

Sequence
(BLAST)

001: MALLHRLFRA ARVWRGSLSH HPPSQPRGRR ELRRCFHHVF GALFSLGAIG VAYAHSDEAN YKSSSPIDPP PNHVEDISKK DEVSNKSSLP ADPPPNYADI
101: AKKERARIQE LIQSKGSQYG SLPRFNVSVR GQKITLKFQV PSTCEVAQLI ANIGSQLGAK VSDRTGGSDM MLRSWDNPVA WQITLRSVEK KMEAGASEDD
201: SDEDLCILIF GSLLTSDKVE VEFIKKGSLT TEELEAFVSA LQVAGTKPGQ NKGGDRGSAR EAS

Best Arabidopsis Sequence Match ( AT4G04180.1 )
(BLAST)

001: MAILDKLFRA SRAWRGSLSH SKSMVPSQSP RARELRRCFH HGNFEQSNSK VNQVLRSCST LNDSPYFSMA PAVLGALFSV GVIGVAYAES DEANNDKSSA
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA VRGQKITLKF QVPSTCEVAQ LISNIGSQLG VKVSDRTGGS DMLLRAWDNP
201: VAWQITLRSV ENKKKLGESE DDSDDDLCIL IFGSLLTSDK VEVEFIKKGS LTTEELEAFV SALGVAGTKA GQNKGSGSRG STRDSSTDKS ISQLESMGVR
301: IYGVNKPLGD DSMDEISWDN IAGYDQQKRE IEDTILMALH SPEVYDDIVR GTRSKFESNR PRAVLFEGPP GTGKTSCARV IANQAGIPLL YVPLEAVMSK
401: YYGESERLLG AVFSQANELP DGAIIFLDEI DAFAISRDSE MHEATRRVLS VLLRQIDGFE QEKKVVVIAA TNRKQDLDPA LISRFDSMIM FDLPDLQTRQ
501: EIIAQYAKQL SKPELVQLAQ ATEAMSGRDI RDVCQGAERT WASKLIRRAK AGGEEQKITL PPIQEYLESA EARRKSLRSV TEQKEQKFAA RSKKPLLDFE

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G04180]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.