Factsheet for Solyc02g036330.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055268	Potato	cytosol	98.02	56.73
VIT_10s0116g00260.t01	Wine grape	cytosol	65.84	52.99
KRH36514	Soybean	cytosol	19.8	48.78
CDY16678	Canola	cytosol	27.23	48.25
Zm00001d007450_P001	Maize	cytosol	14.85	37.04
GSMUA_Achr7P19880_001	Banana	cytosol	68.32	36.32
GSMUA_Achr10P...	Banana	cytosol	63.37	32.24
KRH11495	Soybean	mitochondrion	67.33	23.73
KXG30792	Sorghum	mitochondrion	67.82	23.34
VIT_10s0116g00330.t01	Wine grape	mitochondrion	65.84	22.32
TraesCS6A01G311400.1	Wheat	mitochondrion, plastid	64.85	22.13
TraesCS6D01G290700.1	Wheat	mitochondrion	64.85	22.09
Os02t0740300-01	Rice	mitochondrion	66.34	21.93
HORVU6Hr1G076750.17	Barley	mitochondrion	63.86	21.86
Bra029485.1-P	Field mustard	mitochondrion	62.87	21.71
AT4G04180.1	Thale cress	mitochondrion	62.38	21.0
CDX94544	Canola	mitochondrion	61.88	20.53
TraesCS6B01G341600.1	Wheat	cytosol, plastid	64.36	20.28
CDX83073	Canola	endoplasmic reticulum	35.15	18.68
Bra029941.1-P	Field mustard	cytosol	18.32	18.05
Solyc02g062700.2.1	Tomato	nucleus	24.75	7.81
Solyc03g097020.2.1	Tomato	nucleus	24.26	7.75
CDX68520	Canola	cytosol	4.95	6.49
KRH63149	Soybean	cytosol	1.98	2.9
Solyc02g036340.2.1	Tomato	nucleus	2.97	1.59
CDY71527	Canola	mitochondrion	1.49	1.14

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008540	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0017025	GO:GO:0019538	GO:GO:0030433
GO:GO:0031595	GO:GO:0031597	GO:GO:0036402	GO:GO:0045899	GO:GO:1901800	UniProt:K4B5S6
InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23073	PANTHER:PTHR23073:SF29	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc02g036330.2	EnsemblPlants:Solyc02g036330.2.1	UniParc:UPI0002767734	:	:	:

Description

No Description!

Coordinates

chr2:-:30504476..30508052

Molecular Weight (calculated)

22800.9 Da

IEP (calculated)

6.142

GRAVY (calculated)

-0.575

Length

202 amino acids

Sequence
(BLAST)

001: MSKYYGESER LLGKVFSLAN DIPDGAIVFL DEVDSFATAR DGETHEATRR LLSVLLRQID GFEQEKKVVV VAATNRKQDL DPALISRFDS MITFPLPDQQ
101: TRQEIAAQYA KHLTDSELSE FARATEGLSG RDMRDVCQQA ERHWASKIIR GQAPKHEGSG GSLPPLQDYI ESSRNRQRAL FDIEIQKRSM NPTAKKPLFD
201: FA

Best Arabidopsis Sequence Match ( AT4G04180.2 )
(BLAST)

001: MAILDKLFRA SRAWRGSLSH SKSMVPSQSP RARELRRCFH HGNFEQSNSK VNQVLRSCST LNDSPYFSMA PAVLGALFSV GVIGVAYAES DEANNDKSSA
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA ITLKFQVPST CEVAQLISNI GSQLGVKVSD RTGGSDMLLR AWDNPVAWQI
201: TLRSVENKKK LGESEDDSDD DLCILIFGSL LTSDKVEVEF IKKGSLTTEE LEAFVSALGV AGTKAGQNKG SGSRGSTRDS STDKSISQLE SMGVRIYGVN
301: KPLGDDSMDE ISWDNIAGYD QQKREIEDTI LMALHSPEVY DDIVRGTRSK FESNRPRAVL FEGPPGTGKT SCARVIANQA GIPLLYVPLE AVMSKYYGES
401: ERLLGAVFSQ ANELPDGAII FLDEIDAFAI SRDSEMHEAT RRVLSVLLRQ IDGFEQEKKV VVIAATNRKQ DLDPALISRF DSMIMFDLPD LQTRQEIIAQ
501: YAKQLSKPEL VQLAQATEAM SGRDIRDVCQ GAERTWASKL IRRAKAGGEE QKITLPPIQE YLESAEARRK SLRSVTEQKE QKFAARSKKP LLDFE

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G04180]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.