Factsheet for Bra029941.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83073	Canola	endoplasmic reticulum	60.0	32.37
Zm00001d007450_P001	Maize	cytosol	10.24	25.93
Bra029485.1-P	Field mustard	mitochondrion	63.41	22.22
KRH36514	Soybean	cytosol	8.29	20.73
VIT_10s0116g00260.t01	Wine grape	cytosol	24.39	19.92
GSMUA_Achr10P...	Banana	cytosol	37.56	19.4
Solyc02g036330.2.1	Tomato	cytosol	18.05	18.32
PGSC0003DMT400055268	Potato	cytosol	28.78	16.91
KRH11495	Soybean	mitochondrion	45.37	16.23
GSMUA_Achr7P19880_001	Banana	cytosol	27.8	15.0
KXG30792	Sorghum	mitochondrion	40.49	14.14
HORVU6Hr1G076750.17	Barley	mitochondrion	40.0	13.9
TraesCS6D01G290700.1	Wheat	mitochondrion	39.51	13.66
VIT_10s0116g00330.t01	Wine grape	mitochondrion	39.51	13.59
TraesCS6A01G311400.1	Wheat	mitochondrion, plastid	39.02	13.51
Os02t0740300-01	Rice	mitochondrion	39.51	13.26
TraesCS6B01G341600.1	Wheat	cytosol, plastid	39.51	12.64
Solyc02g036340.2.1	Tomato	nucleus	16.1	8.75
KRH63149	Soybean	cytosol	3.9	5.8
Bra011692.1-P	Field mustard	plastid	16.1	5.51
Bra032021.1-P	Field mustard	plastid	14.63	5.17
Bra028131.1-P	Field mustard	nucleus	7.32	5.17
Bra023590.1-P	Field mustard	plastid	15.61	5.05
Bra008582.1-P	Field mustard	plastid	14.15	4.97
Bra021376.1-P	Field mustard	plastid	14.15	4.92
Bra037225.1-P	Field mustard	plastid	15.12	4.29
Bra024472.1-P	Field mustard	plastid	7.8	3.85
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	3.9	2.88
PGSC0003DMT400055267	Potato	mitochondrion	2.44	2.22

Protein Annotations

EnsemblPlants:Bra029941.1	EnsemblPlants:Bra029941.1-P	EnsemblPlantsGene:Bra029941	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR23073	PANTHER:PTHR23073:SF29
PFAM:PF00004	SUPFAM:SSF52540	UniParc:UPI0002544153	UniProt:M4EMC1	MapMan:35.2	:

Description

AT4G04180 (E=7e-029) | AAA-type ATPase family protein

Coordinates

chrA01:-:15085369..15087445

Molecular Weight (calculated)

22585.7 Da

IEP (calculated)

4.514

GRAVY (calculated)

-0.112

Length

205 amino acids

Sequence
(BLAST)

001: MNSSSWFENG NLRAREAMIR LSYFFGALFS VGVAYADPDE VLSHTTSVAW QITLRSAEKK KESGASEDVS DEDLCILILG SLLHFDKVEV EFIKKGSSTT
101: EELEAFVSAL QVAGTKRGQD KASGGRGSEL ERYLVRIIAN QADIPLLYVP LEAVMSKYYG ESERLLGAVF SQANEISDGA IIFLDEIDGF EQDKKVVVIA
201: TTNRK

Best Arabidopsis Sequence Match ( AT4G04180.2 )
(BLAST)

001: MAILDKLFRA SRAWRGSLSH SKSMVPSQSP RARELRRCFH HGNFEQSNSK VNQVLRSCST LNDSPYFSMA PAVLGALFSV GVIGVAYAES DEANNDKSSA
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA ITLKFQVPST CEVAQLISNI GSQLGVKVSD RTGGSDMLLR AWDNPVAWQI
201: TLRSVENKKK LGESEDDSDD DLCILIFGSL LTSDKVEVEF IKKGSLTTEE LEAFVSALGV AGTKAGQNKG SGSRGSTRDS STDKSISQLE SMGVRIYGVN
301: KPLGDDSMDE ISWDNIAGYD QQKREIEDTI LMALHSPEVY DDIVRGTRSK FESNRPRAVL FEGPPGTGKT SCARVIANQA GIPLLYVPLE AVMSKYYGES
401: ERLLGAVFSQ ANELPDGAII FLDEIDAFAI SRDSEMHEAT RRVLSVLLRQ IDGFEQEKKV VVIAATNRKQ DLDPALISRF DSMIMFDLPD LQTRQEIIAQ
501: YAKQLSKPEL VQLAQATEAM SGRDIRDVCQ GAERTWASKL IRRAKAGGEE QKITLPPIQE YLESAEARRK SLRSVTEQKE QKFAARSKKP LLDFE

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G04180]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.