Factsheet for Bra008582.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69409	Canola	plastid	98.28	89.53
AT5G16930.1	Thale cress	plastid	90.57	81.99
Bra023590.1-P	Field mustard	plastid	88.34	81.23
Bra021376.1-P	Field mustard	plastid	79.42	78.47
Bra032021.1-P	Field mustard	plastid	77.02	77.41
VIT_16s0039g02110.t01	Wine grape	plasma membrane	77.02	71.16
Solyc03g097020.2.1	Tomato	nucleus	74.96	69.15
GSMUA_Achr4P17050_001	Banana	vacuole	72.04	68.74
KRH24032	Soybean	mitochondrion, nucleus	72.21	68.23
KRH29004	Soybean	nucleus	72.38	68.06
TraesCS6B01G294300.1	Wheat	peroxisome	61.06	66.67
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	57.8	66.08
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	63.81	64.36
PGSC0003DMT400008177	Potato	cytosol	11.49	63.21
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	66.72	61.16
EES07415	Sorghum	plastid	67.92	61.02
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	66.55	61.01
Os02t0697600-01	Rice	mitochondrion	66.72	60.78
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	65.52	60.16
Zm00001d017707_P003	Maize	plastid	65.52	59.32
Zm00001d051535_P001	Maize	plastid	65.87	58.72
Bra011692.1-P	Field mustard	plastid	58.32	56.76
Bra024472.1-P	Field mustard	plastid	35.68	50.0
Bra037225.1-P	Field mustard	plastid	59.69	48.2
Bra028131.1-P	Field mustard	nucleus	18.35	36.9
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	15.27	32.01
Bra029485.1-P	Field mustard	mitochondrion	15.78	15.73
Bra029941.1-P	Field mustard	cytosol	4.97	14.15

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra008582	EnsemblPlants:Bra008582.1
EnsemblPlants:Bra008582.1-P	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	UniProt:M4CWI5	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF12037	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	SMART:SM00382	SUPFAM:SSF52540
SignalP:SignalP-noTM	UniParc:UPI00025446AE	SEG:seg	:	:	:

Description

AT5G16930 (E=4e-165) | AAA-type ATPase family protein

Coordinates

chrA10:-:12914852..12917699

Molecular Weight (calculated)

63762.6 Da

IEP (calculated)

9.913

GRAVY (calculated)

-0.574

Length

583 amino acids

Sequence
(BLAST)

001: MAQKCAIGLM SALAAAASLS KSNIASADGP LNFSAFSTST PQQQQQGSTP PASGSAKDSS VPGEESDAPP RIRNDNPRTT SAGFDPEALE RGAKALKGIN
101: NSAHAKKVFE SIKTQEETRQ AEFTAKAQEF KALQSQAEAA ENEAQRTRNQ ELVKMQEESS IRREVARRAT EEEIQAQRRQ TEREKAEIER ETIRVKAMAE
201: AEGRARESKL SEDVNRRMLV DRANAEREKW VSAINTTFDH IGGGLRMILT DQNKLVVAVG GITALAAGIY TTRESSRGKY PWSGSLSRVF STLRGGGKEA
301: ASKNGKGFGD VILHPSLQKR IEQLASATAN TKSHQAPFRN MLFYGPPGTG KTMAARELAR KSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL
401: LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI VLALATNRPG DLDSAVADRV DETLEFPLPG EEERFKLLNL YLDKYITKTN LKKPGLLQSL
501: FKKDQQKIEV KGVTEDLLKE AAAKTKGFSG REIAKLMASV QAAVYGSADC LLDANLFREV IDYKVAEHLQ RKKLAGTDTG NKK

Best Arabidopsis Sequence Match ( AT5G16930.1 )
(BLAST)

001: MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXI0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.