Factsheet for Bra029485.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16678	Canola	cytosol	17.44	89.47
AT4G04180.1	Thale cress	mitochondrion	72.31	70.5
CDX94544	Canola	mitochondrion	73.16	70.28
Bra029941.1-P	Field mustard	cytosol	22.22	63.41
Solyc02g036330.2.1	Tomato	cytosol	21.71	62.87
VIT_10s0116g00260.t01	Wine grape	cytosol	26.15	60.96
PGSC0003DMT400055268	Potato	cytosol	35.56	59.6
GSMUA_Achr7P19880_001	Banana	cytosol	36.41	56.05
KRH11495	Soybean	mitochondrion	53.5	54.62
GSMUA_Achr10P...	Banana	cytosol	36.58	53.9
KRH36514	Soybean	cytosol	7.01	50.0
VIT_10s0116g00330.t01	Wine grape	mitochondrion	50.6	49.66
KXG30792	Sorghum	mitochondrion	49.57	49.4
HORVU6Hr1G076750.17	Barley	mitochondrion	48.38	47.97
TraesCS6D01G290700.1	Wheat	mitochondrion	48.38	47.72
TraesCS6A01G311400.1	Wheat	mitochondrion, plastid	47.86	47.3
Os02t0740300-01	Rice	mitochondrion	49.23	47.14
TraesCS6B01G341600.1	Wheat	cytosol, plastid	48.21	43.99
Solyc02g036340.2.1	Tomato	nucleus	21.71	33.69
Zm00001d007450_P001	Maize	cytosol	4.44	32.1
KRH63149	Soybean	cytosol	7.35	31.16
PGSC0003DMT400055267	Potato	mitochondrion	7.69	20.0
Bra011692.1-P	Field mustard	plastid	17.44	17.03
Bra032021.1-P	Field mustard	plastid	16.41	16.55
Bra021376.1-P	Field mustard	plastid	16.24	16.1
Bra008582.1-P	Field mustard	plastid	15.73	15.78
Bra037225.1-P	Field mustard	plastid	18.29	14.82
Bra023590.1-P	Field mustard	plastid	15.9	14.67
Bra024472.1-P	Field mustard	plastid	9.91	13.94
Bra028131.1-P	Field mustard	nucleus	4.44	8.97
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	3.25	6.83

Protein Annotations

EnsemblPlants:Bra029485.1	EnsemblPlants:Bra029485.1-P	EnsemblPlantsGene:Bra029485	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
InterPro:P-loop_NTPase	ncoils:Coil	PANTHER:PTHR23073	PANTHER:PTHR23073:SF29	PFAM:PF00004	ScanProsite:PS00674
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000254270E	UniProt:M4EL18	MapMan:35.1	:

Description

AT4G04180 (E=1e-285) | AAA-type ATPase family protein

Coordinates

chrA09:-:17655666..17658694

Molecular Weight (calculated)

64571.8 Da

IEP (calculated)

6.534

GRAVY (calculated)

-0.377

Length

585 amino acids

Sequence
(BLAST)

001: MAVLHRLFRA ARVWRGSLSH PPSQPRGREL RRCFHHGTVE QSNSKASDVL RSCSTLNESP CFSMAPAVFG ALFSLGAIGV AYADSDEVSN KSSVPADPPP
101: NYADIAKKER ARIQELIQSK GTQYGSFPRF NVSVRGQKIT LKFQVPSTCE VAQLIANIGS QLGVKVSDRT GGSDMILRSW DNPVAWQITL RSVEKKKEAG
201: ASEDDPDEDL CILIFGSLLT SDKVEVEFIK KGSLTTEELE AFVSALQVAG TKPGQNKGGG RGSAREASTD KTISQLESMG VRIYGVNKPL GDDDSVHEIS
301: WDNIAGYEQQ KREIEDTILM ALHSPEVYDD IVRGTRSKFE SNRPRAVLFE GPPGTGKTSC ARVIANQAGI PLLYVPLEAV MSKYYGESER LLGAVFSQAN
401: ELSDGAIIFL DEIDAFAISR DSEMHEATRR VLSVLLRQID GFEQDKKVVV IAATNRKQDL DPALISRFDS MIMFGLPDLQ TRQEIIAQYA KQLSKPELVQ
501: LAHATEAMSG RDIRDVCQGA ERTWASKLIR RAKADGVEQQ QQVTLPPIQE YLESAEARRK ALRSVAEQRE QNLAVRSKKP LLDFE

Best Arabidopsis Sequence Match ( AT4G04180.1 )
(BLAST)

001: MAILDKLFRA SRAWRGSLSH SKSMVPSQSP RARELRRCFH HGNFEQSNSK VNQVLRSCST LNDSPYFSMA PAVLGALFSV GVIGVAYAES DEANNDKSSA
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA VRGQKITLKF QVPSTCEVAQ LISNIGSQLG VKVSDRTGGS DMLLRAWDNP
201: VAWQITLRSV ENKKKLGESE DDSDDDLCIL IFGSLLTSDK VEVEFIKKGS LTTEELEAFV SALGVAGTKA GQNKGSGSRG STRDSSTDKS ISQLESMGVR
301: IYGVNKPLGD DSMDEISWDN IAGYDQQKRE IEDTILMALH SPEVYDDIVR GTRSKFESNR PRAVLFEGPP GTGKTSCARV IANQAGIPLL YVPLEAVMSK
401: YYGESERLLG AVFSQANELP DGAIIFLDEI DAFAISRDSE MHEATRRVLS VLLRQIDGFE QEKKVVVIAA TNRKQDLDPA LISRFDSMIM FDLPDLQTRQ
501: EIIAQYAKQL SKPELVQLAQ ATEAMSGRDI RDVCQGAERT WASKLIRRAK AGGEEQKITL PPIQEYLESA EARRKSLRSV TEQKEQKFAA RSKKPLLDFE

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G04180]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.