Factsheet for Bra028131.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008178	Potato	cytosol, mitochondrion, peroxisome	22.07	55.65
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	43.45	45.32
Bra024472.1-P	Field mustard	plastid	42.76	29.81
Bra011692.1-P	Field mustard	plastid	49.66	24.04
Bra037225.1-P	Field mustard	plastid	55.17	22.16
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	46.9	21.62
Bra023590.1-P	Field mustard	plastid	41.38	18.93
Bra021376.1-P	Field mustard	plastid	37.59	18.47
Bra032021.1-P	Field mustard	plastid	36.9	18.45
Bra008582.1-P	Field mustard	plastid	36.9	18.35
Zm00001d051572_P001	Maize	mitochondrion	37.93	18.18
Zm00001d017783_P002	Maize	mitochondrion	37.24	17.45
TraesCS6D01G253600.1	Wheat	mitochondrion	36.21	17.21
EES07394	Sorghum	mitochondrion	35.86	17.19
TraesCS6A01G273800.1	Wheat	mitochondrion	35.52	16.91
TraesCS6B01G300900.1	Wheat	mitochondrion	35.52	16.89
Os02t0706500-01	Rice	mitochondrion	34.14	16.07
HORVU6Hr1G069110.2	Barley	plastid	35.17	15.91
Bra029941.1-P	Field mustard	cytosol	5.17	7.32
Bra029485.1-P	Field mustard	mitochondrion	8.97	4.44

Protein Annotations

MapMan:35.2	EnsemblPlantsGene:Bra028131	EnsemblPlants:Bra028131.1	EnsemblPlants:Bra028131.1-P	ncoils:Coil	InterPro:DUF3523
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0007005
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	UniProt:M4EH66
PFAM:PF12037	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	TMHMM:TMhelix	UniParc:UPI00025443C2	SEG:seg

Description

AT2G18330 (E=4e-069) | AAA-type ATPase family protein

Coordinates

chrA04:+:5990910..5992902

Molecular Weight (calculated)

32383.9 Da

IEP (calculated)

9.427

GRAVY (calculated)

-0.959

Length

290 amino acids

Sequence
(BLAST)

001: MGHCPMRREQ LRHEDPAQTE GDPRHSSSGS PYSPILSSSK LTSDGRRRQS SDVKDRAAGS EPSSPSSKLT PHVREDRAAA SEKTKQRGRS RARRPRDSSN
101: VGEDRAAASA KKKSSSVGEG TEAGLVDGVA KAQNLRYEDE LARKRLHTDH EAQRRHNVEL VKMQEESSIR KEQARIATEE QIQAQQRQTE KERAELERET
201: ICVKSMADTE GRAHEAKLTE EQNRRMLFDK INGEREKWLA AINTTFGHIE GGVKALLTDR NILIMTIGGA TALAAGVYTT LTYFCVEFLF

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.