Factsheet for Bra021376.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23468	Canola	cytosol	63.56	98.17
Bra032021.1-P	Field mustard	plastid	86.44	87.93
AT3G03060.1	Thale cress	plastid	88.31	82.96
Bra008582.1-P	Field mustard	plastid	78.47	79.42
VIT_16s0039g02110.t01	Wine grape	plasma membrane	80.34	75.12
KRH24032	Soybean	mitochondrion, nucleus	77.12	73.74
KRH29004	Soybean	nucleus	76.95	73.23
Solyc03g097020.2.1	Tomato	nucleus	78.14	72.94
CDY23469	Canola	plastid	21.36	72.83
GSMUA_Achr4P17050_001	Banana	vacuole	74.92	72.34
Bra023590.1-P	Field mustard	plastid	76.1	70.82
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	60.51	70.0
TraesCS6B01G294300.1	Wheat	peroxisome	63.22	69.85
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	65.93	67.3
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	68.64	63.68
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	68.47	63.52
EES07415	Sorghum	plastid	69.66	63.33
Os02t0697600-01	Rice	mitochondrion	68.47	63.12
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	67.29	62.52
Zm00001d017707_P003	Maize	plastid	68.14	62.42
Zm00001d051535_P001	Maize	plastid	68.14	61.47
PGSC0003DMT400008177	Potato	cytosol	11.02	61.32
Bra011692.1-P	Field mustard	plastid	60.85	59.93
Bra037225.1-P	Field mustard	plastid	62.37	50.97
Bra024472.1-P	Field mustard	plastid	35.59	50.48
Bra028131.1-P	Field mustard	nucleus	18.47	37.59
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	14.75	31.3
Bra029485.1-P	Field mustard	mitochondrion	16.1	16.24
Bra029941.1-P	Field mustard	cytosol	4.92	14.15

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra021376	EnsemblPlants:Bra021376.1
EnsemblPlants:Bra021376.1-P	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	UniProt:M4DXY0	InterPro:P-loop_NTPase
PFAM:PF00004	PFAM:PF12037	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	SMART:SM00382	SUPFAM:SSF52540
SignalP:SignalP-noTM	UniParc:UPI0002544CD3	SEG:seg	:	:	:

Description

AT3G03060 (E=1e-232) | ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA01:+:25486710..25489555

Molecular Weight (calculated)

64737.7 Da

IEP (calculated)

9.362

GRAVY (calculated)

-0.550

Length

590 amino acids

Sequence
(BLAST)

001: MAQKCAIGLI TAVAASVSLS QSKVAAADGP FTFPPANPQQ QAASSPPSTA GEESSAPPPP PRARNDNPRT SSGGFDPEAL ERGAKALKEI NNSSYAKNVF
101: ESIKQQEETK QTEFAAKAQE YKAMQAQAET AENEYHRTRN QELVKMQEDS AIRQEQARRA TEEQIQAQRR QTEREKAEIE RETIKVKAIA EAEGRAHEAR
201: LAEDVNRRML VDRANAEREK WVAAINTTFD HIGGGLRAIL TDQNKLIVAV GGATALAAGI YTTREGAKVI WSYVDRILGQ PSLIRESSRG KYPWSGSVSR
301: VMSTLRGKGS AASNGKGFGD VILHPSLQKR IEHLANATAN TKSHQAPFRN MLFYGPPGTG KTMAARELAR KSGLDYALMT GGDVAPLGSQ AVTKIHQLFD
401: WGKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI VLALATNRPG DLDSAVADRV DEVLEFPLPG EEERFKLLSL YLEKYIAQAG
501: PRKPGLFDRL FKKEQQKIEI KGVTEELLKE AAAKTEGFSG REIAKLMASV QAAVYGSEDC VLDSVLFREV VDYKVAEHQQ RRKLAGTDSK

Best Arabidopsis Sequence Match ( AT3G03060.1 )
(BLAST)

001: MAQKCAIGLI SALAASASLA KSKVASADGP FNLSGFSTSA NPQQQASPPP PSLAGEESSA PPRARNDNPR TSSGGFDPEA LERGAKALKE INHSSYAKKV
101: FESIKQQEET KQTEFATKAQ EFKAMQAQAE TERHKVIYDE QKKLAQHQAQ TKSQMARYED DLARKRMQAE NEFHRTRNQE LVKMQEDSAI RQEQARRATE
201: EQIQAQRRQT EREKAEIERE TIRVKAIAEA EGRAHEARLA EDVNRRMLVD RANAEREKWV AAINTTFDHI GGGLRAILTD QNKLIVAVGG VTALAAGIYT
301: TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSLSRVM STLRGKESAS KNGKRFGDVI LHPPLAKRIE HLATSTANTK LHQAPFRNIL LHGPPGTGKT
401: MAARELARKS GLDYALMTGG DVAPLGAQAV TKIHELFDWG KKSKRGLLLF IDEADAFLCE RNKTYMSEAQ RSALNALLFR TGDQSKDIVL ALATNRPGDL
501: DSAVADRVDE VLEFPLPGEE ERFKLLNLYL EKYIAEAGPS KPGLFDRLFK KEQQKIEIKG VTEELLKEAA AKTEGFSGRE IAKLMASVQA AVYGSEDCVL
601: DSMLFREVVD YKVAEHQQRR KLAGVDSK

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WVF7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.