CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 3
nucleus 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017707_P003	Maize	plastid	92.76	93.48
Zm00001d051535_P001	Maize	plastid	92.76	92.05
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	64.1	81.57
TraesCS6B01G294300.1	Wheat	peroxisome	67.03	81.46
CDY23468	Canola	cytosol	47.3	80.37
CDY16967	Canola	cytosol	47.3	79.33
Os02t0697600-01	Rice	mitochondrion	77.66	78.75
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	70.11	78.72
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	75.5	77.04
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	75.35	76.89
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	74.58	76.22
GSMUA_Achr4P17050_001	Banana	vacuole	68.72	73.0
KRH24032	Soybean	mitochondrion, nucleus	67.03	70.5
KRH29004	Soybean	nucleus	67.03	70.16
VIT_16s0039g02110.t01	Wine grape	plasma membrane	68.1	70.05
Bra021376.1-P	Field mustard	plastid	63.33	69.66
CDY43155	Canola	plastid	61.79	69.14
Bra032021.1-P	Field mustard	plastid	61.63	68.97
Solyc03g097020.2.1	Tomato	nucleus	66.56	68.35
Bra008582.1-P	Field mustard	plastid	61.02	67.92
CDX69409	Canola	plastid	66.87	67.81
AT5G16930.1	Thale cress	plastid	67.03	67.55
AT3G03060.1	Thale cress	plastid	65.18	67.36
CDY28733	Canola	plastid	64.56	66.72
CDY49920	Canola	plastid	65.64	66.67
KXG38569	Sorghum	cytosol	5.7	66.07
CDX85480	Canola	plastid	62.4	65.32
Bra023590.1-P	Field mustard	plastid	62.56	64.04
CDY38078	Canola	plastid	61.33	63.88
PGSC0003DMT400008177	Potato	cytosol	9.86	60.38
EES07394	Sorghum	mitochondrion	53.77	57.69
CDY16968	Canola	cytosol, extracellular, plastid	15.72	43.4
CDY23469	Canola	plastid	11.56	43.35
KXG30792	Sorghum	mitochondrion	14.18	15.67

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	EntrezGene:8073880	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	UniProt:C5Y0F6
ncoils:Coil	InterPro:DUF3523	EnsemblPlants:EES07415	ProteinID:EES07415	ProteinID:EES07415.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	SMART:SM00382
EnsemblPlantsGene:SORBI_3004G272400	SUPFAM:SSF52540	unigene:Sbi.5076	UniParc:UPI0001A86206	RefSeq:XP_002454439.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:61617923..61622843

Molecular Weight (calculated)

72164.9 Da

IEP (calculated)

10.024

GRAVY (calculated)

-0.652

Length

649 amino acids

Sequence
(BLAST)

001: MAAAAAAKAA AAAVSAGAAF ALSSERAHAD GGGSTFRFPG FYSSAPAQAP SPAAPPPQQS PPPSGGRRED APEEPPKVST QHPRTSAAGF DPAPLERGVE
101: ALNQINKSPD PKKLFELMKK REETHQQEIA AKKLEFQKSL AEIELEQKRV DFEERKKLDQ QRAKFKSQTA QYEDELKRKR LQAEHEAQRI RNQELVKMQE
201: ESGIRLEQIR RATEEQIQEQ RRQTERHKAD LEQKTISKKA MAEAEGRILV TKQTEDVKRR LLLEEINADR EKWIQVINTT FEHIGGGLRT ILTDQNKLVV
301: AVGGITALAA GIYTTREGAR VVWGYVDRIL GQPSLIRESS RGKYPWSGSL SRATSTLTSK LKNGSNLGKD GNGFGDVILN PSLQKRVKQL ANATANTKLH
401: QAPFRNMLFY GPPGTGKTMA ARELARNSGL DYALMTGGDV APLGSQAVTK IHQLFDWAKK SNRGLLLFID EADAFLCERN KTYMSEAQRS ALNALLFRTG
501: DQSKDIVLAL ATNRPGDLDS AVADRIDEVL EFPLPGEDER FKLLKLYLDK YIIKAGDKHE KSWLRFFRRQ PQKIEVKGIT DDLIREAAAK TQGFSGREIA
601: KMMASVQAAV YGSKDCELTP GLFREVVDYK VAEHQQRRRL AGEEPKQNA

Best Arabidopsis Sequence Match ( AT5G16930.1 )
(BLAST)

001: MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXI0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.