Factsheet for TraesCS6B01G294300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G016640.4	Barley	cytosol, nucleus, peroxisome	89.14	93.33
HORVU0Hr1G032110.1	Barley	cytosol, nucleus	94.57	87.37
CDY23468	Canola	cytosol	58.8	82.2
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	97.38	81.76
TraesCS6A01G266900.1	Wheat	peroxisome, plastid	97.38	81.76
CDY16967	Canola	cytosol	57.68	79.59
HORVU6Hr1G067630.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	94.57	79.53
EES07415	Sorghum	plastid	81.46	67.03
Os02t0697600-01	Rice	mitochondrion	79.59	66.41
Zm00001d017707_P003	Maize	plastid	79.96	66.3
KRH24032	Soybean	mitochondrion, nucleus	75.66	65.48
Zm00001d051535_P001	Maize	plastid	80.15	65.44
Bra032021.1-P	Field mustard	plastid	70.97	65.34
CDY43155	Canola	plastid	70.79	65.17
KRH29004	Soybean	nucleus	75.09	64.68
VIT_16s0039g02110.t01	Wine grape	plasma membrane	76.03	64.34
GSMUA_Achr4P17050_001	Banana	vacuole	73.41	64.16
Bra021376.1-P	Field mustard	plastid	69.85	63.22
CDY28733	Canola	plastid	74.34	63.22
PGSC0003DMT400008177	Potato	cytosol	12.55	63.21
Solyc03g097020.2.1	Tomato	nucleus	74.53	62.97
CDX69409	Canola	plastid	74.91	62.5
AT5G16930.1	Thale cress	plastid	75.28	62.42
AT3G03060.1	Thale cress	plastid	72.85	61.94
CDY49920	Canola	plastid	73.97	61.82
Bra008582.1-P	Field mustard	plastid	66.67	61.06
CDX85480	Canola	plastid	70.6	60.81
CDY38078	Canola	plastid	70.6	60.51
Bra023590.1-P	Field mustard	plastid	71.35	60.09
TraesCS6B01G300900.1	Wheat	mitochondrion	61.05	53.44
CDY16968	Canola	cytosol, extracellular, plastid	12.73	28.94
CDY23469	Canola	plastid	7.49	23.12
TraesCS6B01G341600.1	Wheat	cytosol, plastid	14.61	12.17

Protein Annotations

EnsemblPlants:TraesCS6B01G294300.1	EnsemblPlantsGene:TraesCS6B01G294300	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:DUF3523	InterPro:P-loop_NTPase	ncoils:Coil
PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	PFAM:PF00004	PFAM:PF12037	SEG:seg	SMART:SM00382
SUPFAM:SSF52540	TIGR:cd00009	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr6B:+:528617393..528622126

Molecular Weight (calculated)

59974.7 Da

IEP (calculated)

9.864

GRAVY (calculated)

-0.580

Length

534 amino acids

Sequence
(BLAST)

001: MVVQSFAHAN KREETRQAEF AARKADYLKE AAQIELERTR VEYEEKKKLA QSQAEIKAQV ARYEDELRRK RAQHEHEAQR ARNQELVKMQ EESAIKLEQL
101: RRQSEEEISE LRRRTEKEKA RIEQETMRLQ AMAEAEAKAL ELKLSEDVKR RLLIERANAE REKWVQAINT TFEHIGGGLR TILTDQNKLV VAVGGATALA
201: AGIYTTREGA RVVWGYVDRI LGQPSLIRES SRGKYPWSGV PSRAMSAVTS KLKNGSNLGK DGKGFGDVIL NPSLQKRVNQ LANATANTKL HQAPFRNMLF
301: YGPPGTGKTM AARELARESG LDYALMTGGD VAPLGSQAVT KIHQLFDWAK KSNRGLLLFI DEADAFLCER NKTYMSEAQR SALNALLFRT GDQSKDIVLA
401: LATNRPGDLD SAVADRIDEV LEFPLPGEEE RSKLLKLYLD KYIVKAGEKR KGLFSFFRRQ PQQIAVKGVT DELIQEAAAK TDGFSGREIA KLMASVQAAV
501: YGSTECELTP GLFREVVDYK VAEHQQRRKI AGHA

Best Arabidopsis Sequence Match ( AT5G16930.1 )
(BLAST)

001: MAQKIAIGVI SALAASASLA PSKFAAADGP FTFSGFSTSP SASIPQQQGS TPPASESGKE PSVAGEESDA PPRIRNNNPR TTSAGFDPEA LERGAKALKG
101: INNSAHAKKV FESIKTREET RQAEFTAKAQ EFKAMQSQAE AERQRVIYEE QKKLAQHQAQ TKSQMARYED ELARKRMQAE NEAQRTRNQE LVKMQEESAI
201: RREVARRATE EEIQAQRRQT EREKAEIERE TIRVKAMAEA EGRARESKLS EDVNRRMLVD RANAEREKWV SAINTTFDHI GGGLRTILTD QNKLIVAVGG
301: LTALAAGIYT TREGAKVIWS YVDRILGQPS LIRESSRGKY PWSGSASRVL STLRGGGKES TSKTGKGFGD VILRPALEKR IEQLANATAN TKAHQAPFRN
401: ILFYGPPGTG KTMAARELAR RSGLDYALMT GGDVAPLGAQ AVTKIHQLFD WSKKSKRGLL LFIDEADAFL CERNKTYMSE AQRSALNALL FRTGDQSKDI
501: VLALATNRPG DLDSAVADRI DETLEFPLPG EEERFKLLNL YLEKYISKTN LKKPGLLQSL FKKEQQTIEI KGVTEDLLKE AAAKTKGFSG REIAKLMASV
601: QAAVYGSANC LLDANLFREV IDYKVAEHQQ RKKLAGTDAG NKKK

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXI0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.