Factsheet for Bra011692.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64607	Canola	plastid	97.0	97.32
AT4G36580.1	Thale cress	plastid	87.81	83.23
PGSC0003DMT400040085	Potato	extracellular	44.74	75.28
VIT_04s0023g01900.t01	Wine grape	plastid	74.29	70.97
Solyc02g062700.2.1	Tomato	nucleus	73.62	68.91
KRH76781	Soybean	nucleus	70.78	67.73
KRH28685	Soybean	nucleus	71.29	67.67
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	69.78	66.45
Bra037225.1-P	Field mustard	plastid	79.47	65.93
Bra024472.1-P	Field mustard	plastid	45.41	65.38
Zm00001d051572_P001	Maize	mitochondrion	64.27	63.64
EES07394	Sorghum	mitochondrion	63.61	62.98
Os02t0706500-01	Rice	mitochondrion	64.27	62.5
Bra032021.1-P	Field mustard	plastid	60.43	62.41
TraesCS6A01G273800.1	Wheat	mitochondrion	62.6	61.58
TraesCS6D01G253600.1	Wheat	mitochondrion	62.6	61.48
Zm00001d017783_P002	Maize	mitochondrion	63.27	61.23
Bra021376.1-P	Field mustard	plastid	59.93	60.85
TraesCS6B01G300900.1	Wheat	mitochondrion	61.94	60.82
Bra008582.1-P	Field mustard	plastid	56.76	58.32
Bra023590.1-P	Field mustard	plastid	59.93	56.62
HORVU6Hr1G069110.2	Barley	plastid	58.6	54.76
Bra028131.1-P	Field mustard	nucleus	24.04	49.66
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	19.2	41.37
Bra029485.1-P	Field mustard	mitochondrion	17.03	17.44
Bra029941.1-P	Field mustard	cytosol	5.51	16.1

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra011692
EnsemblPlants:Bra011692.1	EnsemblPlants:Bra011692.1-P	ncoils:Coil	InterPro:DUF3523	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0007005	GO:GO:0008150	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
UniProt:M4D5D5	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674	PANTHER:PTHR23075
PANTHER:PTHR23075:SF3	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI00025469BD	SEG:seg	:

Description

AT2G18330 (E=1e-240) | AAA-type ATPase family protein

Coordinates

chrA01:-:1025690..1028286

Molecular Weight (calculated)

67619.4 Da

IEP (calculated)

9.646

GRAVY (calculated)

-0.676

Length

599 amino acids

Sequence
(BLAST)

001: MARWFPFFSS SPPPPSDSPA NQSSSESKTE RDEPKGSGFD PEALERAAKA LREINSSPHS KQVFDLMRKQ EKTRLAESAA DKSRNDAIQA HSDIERQQRL
101: AEAQRSLLQT EALTKAQTLR YEDELARKRQ QTDHEAQRHH NVELVRMQEE SSMRKERSRI STEEQIQAQR RQTEKERAEL ERETIRVKAM AEAEGRAHEA
201: KLTEDQNRRL LMERINGERE KWLAAINTMF GHIEGGFRTL LTDRNKLIVA VGGATALAAG VYTTREGARV TWGYINRMLG QPSLIRESSM GRFPLAGTMS
301: HLKNRISGVA AASAAKGSKP LDNVILHPSL KKRIEHLARA TSNTKSHQAP FRNMMFYGPP GTGKTMVARE IARKSGLDYA MMTGGDVAPL GSQAVTKIHQ
401: IFDWAKTSNK GLLLFIDEAD AFLCERNSVY MSEAQRSALN ALLFRTGDQS RDIVLVLATN RPGDLDSAVT DRIDEVIEFP LPGEEERFKL LNLYLNNYLK
501: KNEENKDTKW SHLFKKLSQK IRVEDDLTDK VISEAARKTE GFSGREIAKL VAGVQAGVYG RKDCVLDSQL FKEIVEYKVE EHHQRIRLAS ESCQPLLFS

Best Arabidopsis Sequence Match ( AT4G36580.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS SRFRFPFFSS SPSPPPSDSP ANQSSSKSKA EPDEPKGSGF DPEALERAAK ALRDINSSPH SKQVFDLMRK
101: QEKTRLAELT AETSHYEAIQ AHNDIGRQQK LAEDQRNLLQ TQAQTKAQNL RYEDELARKR QQTDHEAQRH HNVELVKMQE ASSIRKEKAK IATEEQIQAQ
201: HRQTEKERAE LERETIRVKA MAEAEGRAHE AKLTEEQNRR LLMERINGER EKWLAAINTM FSHIEGGFRT LLTDRNKLIM TVGGATALAA GVYTTREGAR
301: VTWGYINRML GQPSLIRESS MRRFPWTGSV SQFKNRISGA AAASAAEGKK PLDNVILHTS LKKRIERLAR ATANTKSHQA PFRNMMFYGP PGTGKTMVAR
401: EIARKSGLDY AMMTGGDVAP LGSQAVTKIH QIFDWAKKSN KGLLLFIDEA DAFLCERNST YMSEAQRSAL NALLFRTGDQ SRDIVLVLAT NRRGDLDSAV
501: TDRIDEVIEF PLPGEEERFK LLNLYLNKYL KMGDNNEDTK PKWSHLFKKL SQKITVEEDL TDKVISEAAK KTEGFSGREI AKLVAGVQAG VYGRADCVLD
601: SQLFKEIVEY KVEEHHRRHM LASEGFQPLL FS

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4JQE9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.