Factsheet for TraesCS6D01G253600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G300900.1	Wheat	mitochondrion	98.36	98.36
TraesCS6A01G273800.1	Wheat	mitochondrion	97.38	97.54
HORVU6Hr1G069110.2	Barley	plastid	83.28	79.25
Os02t0706500-01	Rice	mitochondrion	74.1	73.38
Zm00001d051572_P001	Maize	mitochondrion	72.3	72.89
EES07394	Sorghum	mitochondrion	72.3	72.89
PGSC0003DMT400040085	Potato	extracellular	42.46	72.75
Zm00001d017783_P002	Maize	mitochondrion	71.48	70.44
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane	66.72	64.71
CDY36475	Canola	plastid	64.92	62.86
CDY64607	Canola	plastid	61.48	62.81
Bra011692.1-P	Field mustard	plastid	61.48	62.6
AT2G18330.1	Thale cress	plastid	65.08	62.42
Solyc02g062700.2.1	Tomato	nucleus	65.41	62.34
KRH76781	Soybean	nucleus	63.93	62.3
KRH28685	Soybean	nucleus	64.43	62.28
CDX69234	Canola	cytosol, plastid	60.98	62.21
VIT_04s0023g01900.t01	Wine grape	plastid	63.93	62.2
AT4G36580.1	Thale cress	plastid	62.95	60.76
CDY30315	Canola	plastid	64.43	59.37
TraesCS6D01G247700.1	Wheat	peroxisome, plastid	57.38	55.03
Bra037225.1-P	Field mustard	plastid	64.75	54.71
CDY51218	Canola	plastid	64.1	54.53
Bra024472.1-P	Field mustard	plastid	36.23	53.12
CDY29229	Canola	mitochondrion	30.82	51.23
PGSC0003DMT400008178	Potato	cytosol, mitochondrion, peroxisome	9.18	48.7
CDX96098	Canola	mitochondrion	16.07	41.18
Bra028131.1-P	Field mustard	nucleus	17.21	36.21
Bra004219.1-P	Field mustard	endoplasmic reticulum, extracellular	14.26	31.3
TraesCS6D01G290700.1	Wheat	mitochondrion	15.57	16.02

Protein Annotations

EnsemblPlants:TraesCS6D01G253600.1	EnsemblPlantsGene:TraesCS6D01G253600	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:DUF3523	InterPro:P-loop_NTPase
ncoils:Coil	PANTHER:PTHR23075	PANTHER:PTHR23075:SF3	PFAM:PF00004	PFAM:PF12037	ScanProsite:PS00674
SEG:seg	SMART:SM00382	SUPFAM:SSF52540	TIGR:cd00009	MapMan:35.2	:

Description

No Description!

Coordinates

chr6D:+:357585415..357589555

Molecular Weight (calculated)

68250.8 Da

IEP (calculated)

9.697

GRAVY (calculated)

-0.546

Length

610 amino acids

Sequence
(BLAST)

001: MRRLLRPAKA AASVAAGAAV LASFGEVAYA DSIFSFRRQP AAPPPPPPPD APAPAAASSG SSGFDPEELE RGARALRQIN GSRYAKLLFG LMQSQEETRL
101: AEMAAEKVRH DIYWKVKEIE AKRKMGEEYR ENLKQQSQIE AQRLRYEDEL AKKRKQEERE AERRQDAELV RMQEIGALKR EQARRATEQK ILEQELQTLK
201: ERAKNDRETN KENAISNAKA KAHEAKLTED YERRMLVELM NGEREKWLAA INTTFQHIEG GLRTLLTDRS KLVMGIGGVT ALAAGVYTTR EGARVTWGYI
301: NRILGQPSLI RESSMRKFPL PGLKALKPSS ASLSGGAGFE NVILHPSLKR RIEHLARATA NTKSHDAPFR NMLFYGHPGT GKTLVAREMA RKSGLDYAMM
401: TGGDVAPLGS EAVTKIHEIF DWAKKSQKGL LLFIDEADAF LCERNSTHMS EAQRSALNAL LFRTGDQSRD IVLVLATNRP GDLDAAITDR IDEVIEFPLP
501: GEEERFQLLK LYLNNYMLKD DDKSSPWSTL LKKQPKKIHV RDISDDLLRD AARKIDGFSG REIAKLMASV QAAVYGSPDC ILNPQLFSEV VEYKIAEHQQ
601: RMKLASEAAA

Best Arabidopsis Sequence Match ( AT2G18330.1 )
(BLAST)

001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPW5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.