Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 6
- nucleus 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029485.1-P | Field mustard | mitochondrion | 70.5 | 72.31 |
| CDX94544 | Canola | mitochondrion | 72.67 | 71.59 |
| CDY16678 | Canola | cytosol | 13.17 | 69.3 |
| VIT_10s0116g00260.t01 | Wine grape | cytosol | 26.5 | 63.35 |
| Solyc02g036330.2.1 | Tomato | cytosol | 21.0 | 62.38 |
| PGSC0003DMT400055268 | Potato | cytosol | 34.67 | 59.6 |
| GSMUA_Achr7P19880_001 | Banana | cytosol | 35.67 | 56.32 |
| KRH11495 | Soybean | mitochondrion | 52.5 | 54.97 |
| GSMUA_Achr10P... | Banana | cytosol | 36.0 | 54.41 |
| VIT_10s0116g00330.t01 | Wine grape | mitochondrion | 51.0 | 51.34 |
| KRH36514 | Soybean | cytosol | 6.83 | 50.0 |
| HORVU6Hr1G076750.17 | Barley | mitochondrion | 48.17 | 48.98 |
| KXG30792 | Sorghum | mitochondrion | 47.83 | 48.89 |
| TraesCS6D01G290700.1 | Wheat | mitochondrion | 47.5 | 48.06 |
| TraesCS6A01G311400.1 | Wheat | mitochondrion, plastid | 47.17 | 47.8 |
| Os02t0740300-01 | Rice | mitochondrion | 47.83 | 46.97 |
| TraesCS6B01G341600.1 | Wheat | cytosol, plastid | 47.33 | 44.31 |
| Zm00001d007450_P001 | Maize | cytosol | 4.67 | 34.57 |
| Solyc02g036340.2.1 | Tomato | nucleus | 21.67 | 34.48 |
| KRH63149 | Soybean | cytosol | 7.33 | 31.88 |
| PGSC0003DMT400055267 | Potato | mitochondrion | 6.83 | 18.22 |
| AT2G18330.1 | Thale cress | plastid | 18.0 | 16.98 |
| AT4G36580.1 | Thale cress | plastid | 16.83 | 15.98 |
| AT3G03060.1 | Thale cress | plastid | 16.33 | 15.61 |
| AT5G16930.1 | Thale cress | plastid | 16.5 | 15.37 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:825733 | InterPro:AAA+_ATPase | ProteinID:AEE82370.2 |
| ArrayExpress:AT4G04180 | EnsemblPlantsGene:AT4G04180 | RefSeq:AT4G04180 | TAIR:AT4G04180 | RefSeq:AT4G04180-TAIR-G | EnsemblPlants:AT4G04180.1 |
| TAIR:AT4G04180.1 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ncoils:Coil | UniProt:F4JGS0 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 | GO:GO:0009056 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0017025 | GO:GO:0019538 | GO:GO:0030433 |
| GO:GO:0031595 | GO:GO:0031597 | GO:GO:0036402 | GO:GO:0045899 | GO:GO:1901800 | RefSeq:NP_001319863.1 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009046 |
| PO:PO:0009052 | ScanProsite:PS00674 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF29 | SMART:SM00382 | SUPFAM:SSF52540 |
| UniParc:UPI0008492792 | SEG:seg | : | : | : | : |
Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G04180]
Coordinates
chr4:+:2020420..2023992
Molecular Weight (calculated)
66320.6 Da
IEP (calculated)
5.537
GRAVY (calculated)
-0.432
Length
600 amino acids
Sequence
(BLAST)
(BLAST)
001: MAILDKLFRA SRAWRGSLSH SKSMVPSQSP RARELRRCFH HGNFEQSNSK VNQVLRSCST LNDSPYFSMA PAVLGALFSV GVIGVAYAES DEANNDKSSA
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA VRGQKITLKF QVPSTCEVAQ LISNIGSQLG VKVSDRTGGS DMLLRAWDNP
201: VAWQITLRSV ENKKKLGESE DDSDDDLCIL IFGSLLTSDK VEVEFIKKGS LTTEELEAFV SALGVAGTKA GQNKGSGSRG STRDSSTDKS ISQLESMGVR
301: IYGVNKPLGD DSMDEISWDN IAGYDQQKRE IEDTILMALH SPEVYDDIVR GTRSKFESNR PRAVLFEGPP GTGKTSCARV IANQAGIPLL YVPLEAVMSK
401: YYGESERLLG AVFSQANELP DGAIIFLDEI DAFAISRDSE MHEATRRVLS VLLRQIDGFE QEKKVVVIAA TNRKQDLDPA LISRFDSMIM FDLPDLQTRQ
501: EIIAQYAKQL SKPELVQLAQ ATEAMSGRDI RDVCQGAERT WASKLIRRAK AGGEEQKITL PPIQEYLESA EARRKSLRSV TEQKEQKFAA RSKKPLLDFE
101: PIDPNDETSS APIDPPPNYV DIAKKERARV EELIQSKGTQ YGSYPRFNVA VRGQKITLKF QVPSTCEVAQ LISNIGSQLG VKVSDRTGGS DMLLRAWDNP
201: VAWQITLRSV ENKKKLGESE DDSDDDLCIL IFGSLLTSDK VEVEFIKKGS LTTEELEAFV SALGVAGTKA GQNKGSGSRG STRDSSTDKS ISQLESMGVR
301: IYGVNKPLGD DSMDEISWDN IAGYDQQKRE IEDTILMALH SPEVYDDIVR GTRSKFESNR PRAVLFEGPP GTGKTSCARV IANQAGIPLL YVPLEAVMSK
401: YYGESERLLG AVFSQANELP DGAIIFLDEI DAFAISRDSE MHEATRRVLS VLLRQIDGFE QEKKVVVIAA TNRKQDLDPA LISRFDSMIM FDLPDLQTRQ
501: EIIAQYAKQL SKPELVQLAQ ATEAMSGRDI RDVCQGAERT WASKLIRRAK AGGEEQKITL PPIQEYLESA EARRKSLRSV TEQKEQKFAA RSKKPLLDFE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.