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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
extracellular: 19038476
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG38569 Sorghum cytosol 3.13 21.43
Os02t0706500-01 Rice mitochondrion 15.93 9.9
Os02t0697600-01 Rice mitochondrion 15.67 9.38
GSMUA_Achr7P19890_001 Banana cytoskeleton, cytosol, peroxisome 3.39 8.5
CDX68521 Canola mitochondrion 3.13 8.28
CDY16679 Canola mitochondrion 3.66 7.18
Os02t0740300-01 Rice mitochondrion 10.97 6.87
Protein Annotations
Gene3D:3.40.50.1110MapMan:35.1EntrezGene:4330677EMBL:AK099325ProteinID:BAD15755.1ProteinID:BAF09986.1
ProteinID:BAS80841.1ProteinID:EAZ24562.1InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:IPR036514EnsemblPlantsGene:Os02g0740400EnsemblPlants:Os02t0740400-02PFAM:PF00657PANTHER:PTHR22835
PANTHER:PTHR22835:SF456UniProt:Q6Z7T3InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeSUPFAM:SSF52266SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0000358B6BRefSeq:XP_015623832.1SEG:seg::
Description
GDSL ESTERASE/LIPASE PROTEIN 44Similar to GSDL-motif lipase. (Os02t0740400-01);Lipase, GDSL domain containing protein. (Os02t0740400-02)
Coordinates
chr2:-:30965666..30967596
Molecular Weight (calculated)
40028.6 Da
IEP (calculated)
9.942
GRAVY (calculated)
0.034
Length
383 amino acids
Sequence
(BLAST)
001: MMRLKVTILV VAFVLSAGVH ISAAAAAAGQ REEVHLVPAV YVFGDSTVDV GNNQYLPGNS PLQLPYGIDF PHSRPTGRFS NGYNVADFIA KLVGFKRSPP
101: AYLSLTPQTS RQLMRGYRGA NYASGGSGIL DTTGTTVVTL TKQIVYFAAT KSKMMSNGGG DGNSSSASAS AIDDLLSKSL FLISDGGNDL FAFLRQSNRT
201: ASQVPSFYAD LLSNYTRHVQ ALYSLGARRF GIIDVPPIGC VPSVRVTSQA GATRCVDAAN DLARGFNSGL RSAMARLAGS GALPGMRYSV GSSYNVVSYL
301: TANPAAAGFK VVNSACCGGG RLNAQVGCGA PNSTYCGNRN GYLFWDGVHG TQATSRKGAA AIYSAPPQMG FASPINFKQL VSS
Best Arabidopsis Sequence Match ( AT1G71250.1 )
(BLAST)
001: MNTNRKKMKV HIGGYVLILA LTVSVILQQP ELVTGQARVP AMFVLGDSLV DAGNNNFLQT VARANFLPYG IDMNYQPTGR FSNGLTFIDL LARLLEIPSP
101: PPFADPTTSG NRILQGVNYA SAAAGILDVS GYNYGGRFSL NQQMVNLETT LSQLRTMMSP QNFTDYLARS LVVLVFGSND YINNYLMPNL YDSSIRFRPP
201: DFANLLLSQY ARQLLTLYSL GLRKIFIPGV APLGCIPNQR ARGISPPDRC VDSVNQILGT FNQGLKSLVD QLNQRSPGAI YVYGNTYSAI GDILNNPAAY
301: GFSVVDRACC GIGRNQGQIT CLPLQTPCPN RNQYVFWDAF HPTQTANSIL ARRAFYGPPS DAYPVNVQQM TLLH
Arabidopsis Description
GDSL esterase/lipase At1g71250 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVV1]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.