Factsheet for PGSC0003DMT400027703

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

mitochondrion: 14983062
cytosol: 22313117
extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

msms PMID: 14983062 doi

Y Balmer, WH Vensel, CK Tanaka, WJ Hurkman, E Gelhaye, N Rouhier, JP Jacquot, W Manieri, P Schürmann, M Droux, BB Buchanan

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g106210.2.1	Tomato	plastid	99.11	98.53
PGSC0003DMT400008101	Potato	mitochondrion	92.32	92.73
VIT_03s0097g00530.t01	Wine grape	mitochondrion	89.07	88.81
KRH42039	Soybean	mitochondrion	88.18	88.18
KRH21710	Soybean	endoplasmic reticulum	87.74	88.13
KRH10640	Soybean	nucleus	87.59	87.98
KRH49859	Soybean	endoplasmic reticulum, nucleus	87.89	87.89
AT5G09590.1	Thale cress	mitochondrion	85.08	84.46
GSMUA_Achr4P19830_001	Banana	mitochondrion	84.79	84.29
Os03t0113700-01	Rice	mitochondrion	83.75	83.88
Bra006027.1-P	Field mustard	mitochondrion	84.34	83.85
CDY56552	Canola	mitochondrion	84.34	83.85
Bra028628.1-P	Field mustard	mitochondrion	84.19	83.82
CDX85810	Canola	mitochondrion	84.19	83.82
CDX81132	Canola	mitochondrion	84.19	83.7
Zm00001d013842_P003	Maize	mitochondrion	83.6	83.48
Zm00001d000295_P001	Maize	mitochondrion, plasma membrane	83.31	83.19
EER91365	Sorghum	mitochondrion	83.31	83.19
Os02t0774300-01	Rice	mitochondrion	83.16	82.92
TraesCSU01G116400.1	Wheat	mitochondrion	81.83	82.44
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	82.13	82.37
TraesCS3A01G305100.3	Wheat	mitochondrion	82.42	81.58
TraesCS1A01G295600.1	Wheat	mitochondrion	82.27	81.55
TraesCS4B01G397600.1	Wheat	mitochondrion	81.54	81.54
TraesCS3D01G296700.1	Wheat	golgi	82.13	81.41
TraesCS3B01G331400.4	Wheat	mitochondrion	81.98	81.14
HORVU4Hr1G089090.8	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	80.95	80.95
HORVU0Hr1G006930.3	Barley	cytosol	56.28	79.54
HORVU3Hr1G073230.9	Barley	endoplasmic reticulum, golgi	80.95	78.51
CDY44807	Canola	mitochondrion	83.31	71.39
PGSC0003DMT400022442	Potato	cytosol	36.93	51.44
PGSC0003DMT400047710	Potato	endoplasmic reticulum	48.01	48.65
PGSC0003DMT400031937	Potato	extracellular	47.86	48.58
PGSC0003DMT400073713	Potato	cytosol	45.49	48.2
PGSC0003DMT400064031	Potato	cytosol, plastid	50.07	48.02
PGSC0003DMT400071337	Potato	cytosol	45.79	47.77
PGSC0003DMT400029104	Potato	cytosol	43.28	47.72
PGSC0003DMT400001182	Potato	cytosol	45.79	47.55
PGSC0003DMT400063543	Potato	endoplasmic reticulum	46.82	47.38
PGSC0003DMT400001058	Potato	cytosol	45.05	47.0
PGSC0003DMT400049441	Potato	cytosol	44.9	46.99
PGSC0003DMT400078163	Potato	cytosol	44.9	46.91
PGSC0003DMT400023039	Potato	cytosol, extracellular	44.76	46.69
PGSC0003DMT400036856	Potato	cytosol	45.05	46.64

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:7.11.2.2.5
ProteinID:AAC60559	ProteinID:AAC60559.2	InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048
UniProt:M1AQ31	HAMAP:MF_00332	PFAM:PF00012	EnsemblPlantsGene:PGSC0003DMG400010677	PGSC:PGSC0003DMG400010677	EnsemblPlants:PGSC0003DMT400027703
PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF333
EMBL:S59747	SUPFAM:SSF100920	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	UniParc:UPI000294C7F8	SEG:seg

Description

Heat shock 70 kDa protein, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG400010677]

Coordinates

chr1:+:82849767..82853621

Molecular Weight (calculated)

72788.9 Da

IEP (calculated)

5.758

GRAVY (calculated)

-0.309

Length

677 amino acids

Sequence
(BLAST)

001: MATAALLRSL RRREFATSSI SAYRTLASNT KPSWCPSLVG AKWAGLARPF SSKPAGNEII GIDLGTTNSC VAVMEGKNPK VIENSEGART TPSVVAFNQK
101: GELLVGTPAK RQAVTNPTNT LSGTKRLIGR RFDDPQTQKE MKMVPYKIVR GSNGDAWVEA NGQQYSPSQI GAFILTKMKE TAEAYLGKSI NKAVITVPAY
201: FNDAQRQATK DAGRIAGLDV QRIINEPTAA ALSYGMNSKE GLVAVFDLGG GTFDVSILEI SNGVFEVKAT NGDTFLGGED FDNALLEFLV SEFKRTEGID
301: LSKDKLALQR LREAAEKAKI ELSSTSQTDI NLPFITADAS GAKHLNITLT RSKFETLVNH LIERTRNPCK NCLKDAGVSL KDVDEVLLVG GMTRVPKVQE
401: IVSEIFGKSP SKGVNPDEAV AMGAALQGGI LRGDVKELLL LDVTPLSLGI ETLGGIFTRL INRNTTIPTK KSQVFSTAAD NQTQVGIKVL QGEREMASDN
501: KLLGEFDLVG IPPAPRGMPQ IEVTFDIDAN GMVTVSAKDK ATSKEQQITI RSSGGLSEDE IDKMVREAEM HAQKDQERKA LIDIRNSADT TIYSIEKSLS
601: EYKEKVPKEV VTEIETAISD LRAAMGTENI DDIKAKLDAA NKAVSKIGEH MAGGSSGGGG AQGGDQPPEA EYEEVKK

Best Arabidopsis Sequence Match ( AT5G09590.1 )
(BLAST)

001: MATAALLRSI RRREVVSSPF SAYRCLSSSG KASLNSSYLG QNFRSFSRAF SSKPAGNDVI GIDLGTTNSC VAVMEGKNPK VIENAEGART TPSVVAFNTK
101: GELLVGTPAK RQAVTNPTNT VSGTKRLIGR KFDDPQTQKE MKMVPYKIVR APNGDAWVEA NGQQYSPSQI GAFILTKMKE TAEAYLGKSV TKAVVTVPAY
201: FNDAQRQATK DAGRIAGLDV ERIINEPTAA ALSYGMTNKE GLIAVFDLGG GTFDVSVLEI SNGVFEVKAT NGDTFLGGED FDNALLDFLV NEFKTTEGID
301: LAKDRLALQR LREAAEKAKI ELSSTSQTEI NLPFITADAS GAKHFNITLT RSRFETLVNH LIERTRDPCK NCLKDAGISA KEVDEVLLVG GMTRVPKVQS
401: IVAEIFGKSP SKGVNPDEAV AMGAALQGGI LRGDVKELLL LDVTPLSLGI ETLGGVFTRL ITRNTTIPTK KSQVFSTAAD NQTQVGIRVL QGEREMATDN
501: KLLGEFDLVG IPPSPRGVPQ IEVTFDIDAN GIVTVSAKDK TTGKVQQITI RSSGGLSEDD IQKMVREAEL HAQKDKERKE LIDTKNTADT TIYSIEKSLG
601: EYREKIPSEI AKEIEDAVAD LRSASSGDDL NEIKAKIEAA NKAVSKIGEH MSGGSGGGSA PGGGSEGGSD QAPEAEYEEV KK

Arabidopsis Description

HSP70-10Heat shock 70 kDa protein 10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LDZ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.