Factsheet for TraesCS4B01G397600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G116400.1	Wheat	mitochondrion	97.19	97.92
TraesCS2D01G575200.1	Wheat	mitochondrion, plastid	95.86	96.15
TraesCS1A01G295600.1	Wheat	mitochondrion	96.9	96.05
HORVU4Hr1G089090.8	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	92.47	92.47
Os03t0113700-01	Rice	mitochondrion	90.1	90.24
Zm00001d013842_P003	Maize	mitochondrion	87.74	87.61
Zm00001d000295_P001	Maize	mitochondrion, plasma membrane	87.74	87.61
EER91365	Sorghum	mitochondrion	87.59	87.46
TraesCS3B01G331400.4	Wheat	mitochondrion	87.74	86.84
VIT_03s0097g00530.t01	Wine grape	mitochondrion	84.49	84.24
GSMUA_Achr3P12480_001	Banana	mitochondrion	75.48	83.63
KRH10640	Soybean	nucleus	83.16	83.53
KRH21710	Soybean	endoplasmic reticulum	83.16	83.53
KRH42039	Soybean	mitochondrion	83.01	83.01
KRH49859	Soybean	endoplasmic reticulum, nucleus	82.72	82.72
VIT_00s0415g00030.t01	Wine grape	mitochondrion	82.27	81.67
PGSC0003DMT400027703	Potato	mitochondrion	81.54	81.54
Solyc01g106210.2.1	Tomato	plastid	81.68	81.2
Solyc01g106260.2.1	Tomato	plastid	80.21	81.04
PGSC0003DMT400008101	Potato	mitochondrion	80.21	80.56
Bra028628.1-P	Field mustard	mitochondrion	80.35	80.0
CDY56552	Canola	mitochondrion	80.35	79.88
CDX85810	Canola	mitochondrion	80.21	79.85
AT5G09590.1	Thale cress	mitochondrion	80.21	79.62
Bra006027.1-P	Field mustard	mitochondrion	80.06	79.59
CDX81132	Canola	mitochondrion	80.06	79.59
CDY44807	Canola	mitochondrion	79.17	67.85
TraesCS5B01G267900.1	Wheat	peroxisome	77.25	64.97
TraesCS1B01G151300.1	Wheat	plastid	50.96	50.29
TraesCS5B01G111200.1	Wheat	golgi, plastid	50.81	49.86
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	47.12	47.97
TraesCS6B01G374500.1	Wheat	cytosol	32.64	47.73
TraesCS4B01G206700.1	Wheat	cytosol	45.2	47.0
TraesCS5B01G087700.4	Wheat	cytosol	44.76	46.83
TraesCS2B01G374700.1	Wheat	cytosol	44.61	46.68
TraesCS6B01G367800.1	Wheat	golgi, plastid	44.61	46.68
TraesCS1B01G294300.1	Wheat	cytosol, golgi, unclear	44.61	46.6
TraesCS5B01G492500.1	Wheat	cytosol	44.61	46.6
TraesCS3B01G390700.1	Wheat	cytosol	44.76	46.47
TraesCS5B01G129700.2	Wheat	cytosol	42.54	46.38
TraesCS3B01G390800.1	Wheat	cytosol	42.25	46.13
TraesCS4B01G205700.1	Wheat	cytosol, golgi	44.61	45.97
TraesCS7B01G331400.1	Wheat	endoplasmic reticulum	44.31	45.45
TraesCS4B01G142400.1	Wheat	cytosol	44.76	45.29
TraesCS5B01G298000.1	Wheat	endoplasmic reticulum, nucleus, unclear	44.61	45.21
TraesCS6B01G374600.1	Wheat	cytosol	34.12	45.12
TraesCS6B01G374400.1	Wheat	cytosol	36.63	44.93
TraesCS7B01G330900.1	Wheat	endoplasmic reticulum	44.02	44.74
TraesCS4B01G206400.1	Wheat	cytosol	37.96	43.71
TraesCS2B01G535000.2	Wheat	cytosol	33.53	42.51
TraesCS3B01G296300.1	Wheat	cytosol	31.61	41.55
TraesCS4B01G206300.1	Wheat	cytosol	35.89	38.09
TraesCS2B01G125400.1	Wheat	vacuole	32.35	33.13

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.3.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:7.11.2.2.5
InterPro:Chaperone_DnaK	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP70_C_sf
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375
PANTHER:PTHR19375:SF333	SUPFAM:SSF100920	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	EnsemblPlantsGene:TraesCS4B01G397600	EnsemblPlants:TraesCS4B01G397600.1
TIGR:cd11733	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:671739110..671743251

Molecular Weight (calculated)

72510.4 Da

IEP (calculated)

5.243

GRAVY (calculated)

-0.274

Length

677 amino acids

Sequence
(BLAST)

001: MAASMMLLLR AARRRDLASP LATLTANVQS TYAAANVCSR WGSFARAFSA KPIGNEVIGI DLGTTNSCVA VMEGKNAKVI ENSEGARTTP SVVAFSQKGE
101: LLVGTPAKRQ AVTNPQNTFF GTKRMIGRRF DDPQTQKEMN MVPYKIVKAP NGDAWVETTD GKQYSPSQIG GFVLTKMKET AEAYLGKSIS KAVITVPAYF
201: NDAQRQATKD AGRIAGLDVQ RIINEPTAAA LSYGTNNKEG LIAVFDLGGG TFDVSILEIS NGVFEVKATN GDTFLGGEDF DNTLLEFLVR EYKNTENIDL
301: SKDRLALQRL REAAEKAKIE LSSTTQTEIN LPFITADAGG AKHLNITLTR SKFESLVNSL IERTREPCKS CLKDAGITTK DVDEVLLVGG MTRVPKVQEI
401: VSEIFGKAPS KGVNPDEAVA MGAAIQGGIL RGDVKELLLL DVTPLSLGIE TLGGIFTRLI SRNTTIPTKK SQVFSTAADN QTQVGIKVLQ GEREMATDNK
501: LLGEFDLVGI PPAPRGTPQV EVTFDIDANG IVTVSAKDKA TGKEQQITIR SSGGLSEAEI QKMVQEAEVH SHKDQERKAL IDVRNAADTT VYSVEKSLGE
601: YRDKVPAEVV SEIEAAVAEL RAEMASDDAE KIKAKIDAAN RAVSKIGQHM SGGGEPGSQG GGGGGEAPEA EYEEVKK

Best Arabidopsis Sequence Match ( AT4G24280.1 )
(BLAST)

001: MASSAAQIHV LGGIGFASSS SSKRNLNGKG GTFMPRSAFF GTRTGPFSTP TSAFLRMGTR NGGGASRYAV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SGDRLVGQIA KRQAVVNPEN TFFSVKRFIG RKMNEVDEES KQVSYRVVRD ENNNVKLECP AINKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFDRK ANETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LAAEFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRAKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QELVRKVTGK EPNVTVNPDE VVALGAAVQA GVLAGDVSDI VLLDVTPLSI GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSLGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAV DKGTGKKQDI TITGASTLPK DEVDQMVQEA ERFAKDDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG EVKEKVEAKL QELKDKIGSG STQEIKDAMA ALNQEVMQIG QSLYNQPGAG GPGAGPSPGG EGASSGDSSS
701: SKGGDGDDVI DADFTDSQ

Arabidopsis Description

HSP70-6Heat shock 70 kDa protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.