Factsheet for TraesCS1B01G151300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 16481623
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 16481623 doi

Y Balmer, WH Vensel, N Cai, W Manieri, P Schürmann, WJ Hurkman, BB Buchanan

Department of Plant and Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G131800.1	Wheat	plastid	98.69	99.27
TraesCS1A01G133100.2	Wheat	golgi	98.83	99.12
Os05t0303000-01	Rice	plastid	62.83	93.9
KXG37805	Sorghum	plastid	91.84	92.38
Zm00001d013507_P001	Maize	plastid	91.84	92.24
Zm00001d033591_P001	Maize	plastid	91.69	92.09
CDY08914	Canola	cytosol	78.28	86.47
CDY34275	Canola	cytosol	78.72	86.4
KRH06058	Soybean	mitochondrion	86.73	86.36
CDY11007	Canola	cytosol	78.28	86.33
HORVU1Hr1G030790.1	Barley	plastid	97.96	86.15
CDY24832	Canola	cytosol	78.43	86.08
GSMUA_Achr9P07750_001	Banana	plastid	80.17	85.54
GSMUA_Achr6P28370_001	Banana	plastid	79.88	85.36
Bra002461.1-P	Field mustard	cytosol	65.6	84.75
Solyc01g103450.2.1	Tomato	plastid	85.57	83.5
PGSC0003DMT400064031	Potato	cytosol, plastid	85.42	83.0
TraesCS5B01G111200.1	Wheat	golgi, plastid	83.09	82.61
VIT_18s0041g01230.t01	Wine grape	plastid	82.65	82.17
AT5G49910.1	Thale cress	plastid	84.84	81.06
AT4G24280.1	Thale cress	plastid	84.55	80.78
CDX92631	Canola	plastid	82.8	80.23
Bra013786.1-P	Field mustard	plastid	83.09	80.17
Bra019231.1-P	Field mustard	plastid	82.65	79.86
Bra010498.1-P	Field mustard	plastid	83.24	79.64
CDY03462	Canola	plastid	82.65	79.63
CDY03461	Canola	plastid	76.53	73.84
CDY03459	Canola	cytosol	64.29	66.62
TraesCS4B01G397600.1	Wheat	mitochondrion	50.29	50.96
TraesCS3B01G331400.4	Wheat	mitochondrion	49.85	50.0
TraesCS5B01G087700.4	Wheat	cytosol	44.61	47.3
TraesCS2B01G374700.1	Wheat	cytosol	44.46	47.14
TraesCS6B01G367800.1	Wheat	golgi, plastid	44.46	47.14
TraesCS6B01G058300.1	Wheat	endoplasmic reticulum	45.63	47.07
TraesCS1B01G294300.1	Wheat	cytosol, golgi, unclear	44.31	46.91
TraesCS5B01G492500.1	Wheat	cytosol	43.88	46.45
TraesCS5B01G129700.2	Wheat	cytosol	41.98	46.38
TraesCS4B01G206700.1	Wheat	cytosol	43.73	46.08
TraesCS6B01G374500.1	Wheat	cytosol	31.05	46.0
TraesCS4B01G205700.1	Wheat	cytosol, golgi	44.02	45.97
TraesCS3B01G390700.1	Wheat	cytosol	43.44	45.71
TraesCS4B01G142400.1	Wheat	cytosol	44.31	45.44
TraesCS3B01G390800.1	Wheat	cytosol	40.96	45.32
TraesCS5B01G298000.1	Wheat	endoplasmic reticulum, nucleus, unclear	43.59	44.76
TraesCS6B01G374600.1	Wheat	cytosol	33.24	44.53
TraesCS7B01G331400.1	Wheat	endoplasmic reticulum	42.57	44.24
TraesCS5B01G267900.1	Wheat	peroxisome	51.9	44.22
TraesCS7B01G330900.1	Wheat	endoplasmic reticulum	42.86	44.14
TraesCS4B01G206400.1	Wheat	cytosol	37.17	43.37
TraesCS6B01G374400.1	Wheat	cytosol	34.69	43.12
GSMUA_Achr6P12370_001	Banana	plastid	80.61	42.31
TraesCS2B01G535000.2	Wheat	cytosol	32.65	41.95
TraesCS3B01G296300.1	Wheat	cytosol	30.03	40.0
TraesCS4B01G206300.1	Wheat	cytosol	34.99	37.62
TraesCS2B01G125400.1	Wheat	vacuole	33.67	34.95

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.4.1	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Chaperone_DnaK
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	HAMAP:MF_00332	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF332
SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	TIGRFAMs:TIGR02350	EnsemblPlantsGene:TraesCS1B01G151300	EnsemblPlants:TraesCS1B01G151300.1
TIGR:cd10234	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:236957822..236963066

Molecular Weight (calculated)

73261.8 Da

IEP (calculated)

4.786

GRAVY (calculated)

-0.286

Length

686 amino acids

Sequence
(BLAST)

001: MATTAFPTST PFFVHHGTRR PSVNLRTTAV VYGRGGRRWR PLRVACEKVV GIDLGTTNSA VAAMEGGKPT IVTNAEGART TPSVVAYTKA GDRLVGQIAK
101: RQAVVNPENT FFSVKRFIGR KMNEVAEESK QVSYLLVRDD NGNVKLDCPA IGKQFAAEEI SAQVLRKLVD DASKFLNDKV TKAVITVPAY FNDSQRTATK
201: DAGRIAGLDV LRIINEPTAA SLAYGFEKKN NETILVFDLG GGTFDVSVLE VGDGVFEVLS TSGDTHLGGD DFDKRIVDWL AGSFKNDEGI DLLKDKQALQ
301: RLTEAAEKAK MELSSLTQTN ISLPFITATA DGPKHIETTL TRGKFEELCS DLLDRLRTPV DNSLRDAKLS LKEIDEVILV GGSTRIPAVQ DLVKKMTGKD
401: PNVTVNPDEV VALGAAVQAG VLSGDVSDIV LLDVTPLSLG LETLGGVMTK IIPRNTTLPT SKSEVFSTAA DGQTSVEINV LQGEREFVRD NKSLGSFRLD
501: GIPPAPRGVP QIEVKFDIDA NGILSVAAVD KGTGKKQDIT ITGASTLPKD EVEKMVEEAE KFAAEDKEKR DAIDTKNQAE SVIYQTEKQL KELGDKVPGD
601: VKEKVEGKLK ELQVAVAGGS TQTIKDALAA LNQEVMQLGQ SLYQQQGSGP TPGADGAADS TGPGPGPSEK TGDGGDVIDA DFTDSN

Best Arabidopsis Sequence Match ( AT5G49910.1 )
(BLAST)

001: MASSAAQIHI LGGIGFPTSS SSSSTKNLDN KTNSIPRSVF FGNRTSPFTT PTSAFLRMGR RNNNASRYTV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SKDRLVGQIA KRQAVVNPEN TFFSVKRFIG RRMNEVAEES KQVSYRVIKD ENGNVKLDCP AIGKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFERK SNETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LASTFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRGKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QDLVRKLTGK EPNVSVNPDE VVALGAAVQA GVLSGDVSDI VLLDVTPLSL GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSIGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAS DKGTGKKQDI TITGASTLPK DEVDTMVQEA ERFAKEDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG PVKEKVEAKL QELKEKIASG STQEIKDTMA ALNQEVMQIG QSLYNQPQPG GADSPPGGEA SSSSDTSSSA
701: KGGDNGGDVI DADFTDSN

Arabidopsis Description

HSP70-7Heat shock 70 kDa protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LTX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.