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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 10
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
 cytosol: 18757068
plastid: 20443193
nucleus: 21132161
mitochondrion: 21766870
endoplasmic reticulum: 27224218
mitochondrion: 27780359
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 20443193 doi
N Ahsan, Y Nanjo, H Sawada, Y Kohno, S Komatsu
National Institute of Crop Science, Tsukuba, Japan.
msms PMID: 18757068 doi
NW Oehrle, AD Sarma, JK Waters, DW Emerich
United States Department of Agriculture, Curtis Hall, University of Missouri, Columbia, MO 65211, United States.
msms PMID: 21766870 doi
S Komatsu, A Yamamoto, T Nakamura, MZ Nouri, Y Nanjo, K Nishizawa, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH26303 Soybean cytosol, endoplasmic reticulum 38.46 99.25
KRH26302 Soybean plastid 37.45 93.48
Os05t0303000-01 Rice plastid 60.23 90.41
CDY08914 Canola cytosol 80.41 89.21
CDY11007 Canola cytosol 80.41 89.07
VIT_17s0000g03310.t01 Wine grape extracellular, plastid 91.29 88.97
CDY24832 Canola cytosol 80.55 88.8
CDY34275 Canola cytosol 80.41 88.64
Solyc01g103450.2.1 Tomato plastid 90.42 88.62
Zm00001d013507_P001 Maize plastid 87.37 88.14
PGSC0003DMT400064031 Potato cytosol, plastid 90.28 88.1
KXG37805 Sorghum plastid 86.94 87.83
Bra002461.1-P Field mustard cytosol 67.63 87.76
TraesCS1D01G131800.1 Wheat plastid 86.79 87.68
Zm00001d033591_P001 Maize plastid 86.65 87.41
TraesCS1A01G133100.2 Wheat golgi 86.65 87.28
GSMUA_Achr6P28370_001 Banana plastid 81.28 87.23
TraesCS1B01G151300.1 Wheat plastid 86.36 86.73
GSMUA_Achr9P07750_001 Banana plastid 80.55 86.31
Bra019231.1-P Field mustard plastid 85.49 82.96
CDX92631 Canola plastid 85.05 82.77
AT4G24280.1 Thale cress plastid 86.21 82.73
Bra010498.1-P Field mustard plastid 85.92 82.57
AT5G49910.1 Thale cress plastid 85.92 82.45
CDY03462 Canola plastid 85.2 82.44
Bra013786.1-P Field mustard plastid 85.05 82.42
HORVU1Hr1G030790.1 Barley plastid 86.5 76.41
CDY03461 Canola plastid 78.52 76.09
CDY03459 Canola cytosol 64.88 67.52
KRH10640 Soybean nucleus 50.22 51.34
KRH21710 Soybean endoplasmic reticulum 50.07 51.19
KRH49859 Soybean endoplasmic reticulum, nucleus 50.22 51.11
KRH42039 Soybean mitochondrion 50.07 50.96
KRH70484 Soybean cytosol 39.62 48.75
KRH01631 Soybean endoplasmic reticulum 45.28 48.07
KRH19702 Soybean endoplasmic reticulum 43.98 47.94
KRH67530 Soybean endoplasmic reticulum, nucleus 45.14 47.63
KRH24810 Soybean nucleus 44.7 47.46
KRG95806 Soybean nucleus 44.99 47.4
KRH29811 Soybean nucleus 44.56 47.3
KRH03029 Soybean nucleus 44.27 47.29
KRH41370 Soybean endoplasmic reticulum 45.57 47.08
KRH60086 Soybean endoplasmic reticulum 45.57 47.01
KRH72327 Soybean endoplasmic reticulum 43.83 46.32
KRH60091 Soybean nucleus 45.43 44.65
KRH41372 Soybean endoplasmic reticulum 44.99 43.79
GSMUA_Achr6P12370_001 Banana plastid 82.15 43.31
KRH01651 Soybean cytosol 37.59 43.02
KRH49659 Soybean endoplasmic reticulum 39.19 42.65
KRH11084 Soybean endoplasmic reticulum 37.88 40.72
KRH11083 Soybean cytosol, endoplasmic reticulum 34.4 40.31
KRH01610 Soybean cytosol, endoplasmic reticulum 39.04 39.97
KRH01609 Soybean cytosol 38.9 39.82
KRH21163 Soybean endoplasmic reticulum 22.93 32.31
KRH70355 Soybean cytosol 39.62 30.61
Protein Annotations
Gene3D:1.20.1270.10EntrezGene:100800698MapMan:19.1.4.1Gene3D:2.60.34.10Gene3D:3.30.420.40Gene3D:3.90.640.10
EMBL:ACUP02009815InterPro:Chaperone_DnaKncoils:CoilEnsemblPlantsGene:GLYMA_16G002500GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006457GO:GO:0008150GO:GO:0009987
GO:GO:0051082InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sfInterPro:Heat_shock_70_CSInterPro:Hsp_70_famUniProt:I1MJU7
InterPro:IPR029047InterPro:IPR029048EnsemblPlants:KRH06058ProteinID:KRH06058ProteinID:KRH06058.1HAMAP:MF_00332
PFAM:PF00012PRINTS:PR00301ScanProsite:PS00297ScanProsite:PS00329ScanProsite:PS01036PANTHER:PTHR19375
PANTHER:PTHR19375:SF332SUPFAM:SSF100920SUPFAM:SSF100934SUPFAM:SSF53067TIGRFAMs:TIGR02350UniParc:UPI000233AD7C
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr16:+:136387..139547
Molecular Weight (calculated)
73758.6 Da
IEP (calculated)
4.948
GRAVY (calculated)
-0.302
Length
689 amino acids
Sequence
(BLAST)
001: MACSSAQIHG LGTPSFSRTL FLGQRLNTKA AFIKVKSAPT PRRLRPLRVV NEKVVGIDLG TTNSAVAAME GGKPTIITNA EGQRTTPSVV AYTKNGDRLV
101: GQIAKRQAVV NPENTFFSVK RFIGRKMSEV DEESKQVSYR VIRDDNGNVK LDCPAIGKQF AAEEISAQVL RKLVDDASKF LNDKVTKAVV TVPAYFNDSQ
201: RTATKDAGRI AGLEVLRIIN EPTAASLAYG FEKKNNETIL VFDLGGGTFD VSVLEVGDGV FEVLSTSGDT HLGGDDFDKR IVDWLASNFK RDEGIDLLKD
301: KQALQRLTET AEKAKMELST LTQTNISLPF ITATADGPKH IETTITRAKF EELCSDLLDR LRTPVENSLR DAKLSFKDLD EVILVGGSTR IPAVQELVKK
401: LTGKDPNVTV NPDEVVALGA AVQAGVLAGD VSDIVLLDVT PLSLGLETLG GVMTKIIPRN TTLPTSKSEV FSTAADGQTS VEINVLQGER EFVRDNKSLG
501: SFRLDGIPPA PRGVPQIEVK FDIDANGILS VAAIDKGTGK KQDITITGAS TLPSDEVERM VNEAEKFSKE DKEKRDAIDT KNQADSVVYQ TEKQLKELGD
601: KVPGPVKEKV EAKLGELKDA ISGGSTQAIK DAMAALNQEV MQLGQSLYNQ PGAAGAGGPT PPGADSGPSE SSGKGPDGDV IDADFTDSK
Best Arabidopsis Sequence Match ( AT5G49910.1 )
(BLAST)
001: MASSAAQIHI LGGIGFPTSS SSSSTKNLDN KTNSIPRSVF FGNRTSPFTT PTSAFLRMGR RNNNASRYTV GPVRVVNEKV VGIDLGTTNS AVAAMEGGKP
101: TIVTNAEGQR TTPSVVAYTK SKDRLVGQIA KRQAVVNPEN TFFSVKRFIG RRMNEVAEES KQVSYRVIKD ENGNVKLDCP AIGKQFAAEE ISAQVLRKLV
201: DDASRFLNDK VTKAVITVPA YFNDSQRTAT KDAGRIAGLE VLRIINEPTA ASLAYGFERK SNETILVFDL GGGTFDVSVL EVGDGVFEVL STSGDTHLGG
301: DDFDKRVVDW LASTFKKDEG IDLLKDKQAL QRLTEAAEKA KIELSSLTQT NMSLPFITAT ADGPKHIETT LTRGKFEELC SDLLDRVRTP VENSLRDAKL
401: SFKDIDEVIL VGGSTRIPAV QDLVRKLTGK EPNVSVNPDE VVALGAAVQA GVLSGDVSDI VLLDVTPLSL GLETLGGVMT KIIPRNTTLP TSKSEVFSTA
501: ADGQTSVEIN VLQGEREFVR DNKSIGSFRL DGIPPAPRGV PQIEVKFDID ANGILSVSAS DKGTGKKQDI TITGASTLPK DEVDTMVQEA ERFAKEDKEK
601: RDAIDTKNQA DSVVYQTEKQ LKELGEKIPG PVKEKVEAKL QELKEKIASG STQEIKDTMA ALNQEVMQIG QSLYNQPQPG GADSPPGGEA SSSSDTSSSA
701: KGGDNGGDVI DADFTDSN
Arabidopsis Description
HSP70-7Heat shock 70 kDa protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LTX9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.