CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 2
endoplasmic reticulum 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG94038
KRH07474
KRH08815
KRH27885
KRH35228
KRH38332
KRH39566
KRH74387
KRH77588

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G12580.1	KRG94038	AT4G11260.1	18065690
AT3G12580.1	KRH08815	AT4G11260.1	18065690
AT3G12580.1	KRH27885	AT4G11260.1	18065690
AT3G12580.1	KRH35228	AT4G11260.1	18065690
AT3G12580.1	KRH38332	AT4G11260.1	18065690
AT3G12580.1	KRH77588	AT4G11260.1	18065690
AT3G12580.1	KRH07474	AT4G17750.1	11807141
AT3G12580.1	KRH39566	AT4G17750.1	11807141
AT3G12580.1	KRH74387	AT4G17750.1	11807141

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01631	Soybean	endoplasmic reticulum	99.11	85.52
Bra001457.1-P	Field mustard	cytosol	87.14	82.99
TraesCS1B01G294300.1	Wheat	cytosol, golgi, unclear	94.64	81.79
Os01t0840100-01	Rice	nucleus, plasma membrane, plastid	94.64	81.79
KRH29811	Soybean	nucleus	94.64	81.66
KRH24810	Soybean	nucleus	94.64	81.66
EES19649	Sorghum	cytosol	94.64	81.66
HORVU1Hr1G072220.4	Barley	cytosol	85.89	81.66
TraesCS1D01G284000.2	Wheat	cytosol, golgi	94.46	81.64
Os05t0460000-01	Rice	cytosol, nucleus, plastid	94.11	81.58
TraesCS1A01G285000.2	Wheat	cytosol, golgi	94.29	81.48
CDY52661	Canola	cytosol	93.75	81.14
Bra038734.1-P	Field mustard	cytosol	94.11	81.08
KXG26133	Sorghum	cytosol	89.11	81.01
CDY00784	Canola	cytosol	93.93	80.92
CDX73815	Canola	cytosol	94.11	80.83
CDY50531	Canola	cytosol	93.75	80.77
EES01731	Sorghum	cytosol	93.39	80.71
Zm00001d042922_P002	Maize	cytosol	93.21	80.56
AT3G12580.1	Thale cress	cytosol	93.39	80.46
Zm00001d010529_P001	Maize	cytosol	93.21	80.43
Zm00001d012420_P001	Maize	plasma membrane	92.86	80.25
KRH19702	Soybean	endoplasmic reticulum	90.54	80.22
KRH67530	Soybean	endoplasmic reticulum, nucleus	93.39	80.09
HORVU4Hr1G059390.1	Barley	cytosol	92.68	79.72
KRG95806	Soybean	nucleus	93.04	79.66
TraesCS3D01G351900.1	Wheat	cytosol	92.68	79.6
TraesCS3B01G390700.1	Wheat	cytosol	92.68	79.6
TraesCS3D01G352400.2	Wheat	cytosol, golgi	91.96	79.6
Os03t0276500-01	Rice	plasma membrane	92.32	79.54
TraesCS4B01G206700.1	Wheat	cytosol	92.14	79.26
TraesCS4D01G207500.1	Wheat	cytosol	92.14	79.26
TraesCS4A01G097900.2	Wheat	cytosol	91.96	78.63
TraesCS3B01G390800.1	Wheat	cytosol	86.96	78.55
EER95095	Sorghum	cytosol	90.89	78.43
Zm00001d028630_P005	Maize	cytosol, extracellular, nucleus, plasma membrane, plastid	90.54	78.12
KRH03029	Soybean	nucleus	86.79	75.35
KRH72327	Soybean	endoplasmic reticulum	86.61	74.39
HORVU3Hr1G086500.3	Barley	cytosol, plastid	93.39	74.18
KRH11083	Soybean	cytosol, endoplasmic reticulum	60.89	57.99
KRH11084	Soybean	endoplasmic reticulum	63.75	55.69
KRH49659	Soybean	endoplasmic reticulum	62.14	54.98
KRH01651	Soybean	cytosol	58.75	54.65
KRH01609	Soybean	cytosol	64.82	53.94
KRH01610	Soybean	cytosol, endoplasmic reticulum	63.75	53.05
KRH21163	Soybean	endoplasmic reticulum	46.25	52.97
KRH60086	Soybean	endoplasmic reticulum	63.04	52.84
KRH41370	Soybean	endoplasmic reticulum	62.68	52.62
KRH60091	Soybean	nucleus	63.39	50.64
KRH41372	Soybean	endoplasmic reticulum	62.86	49.72
KRH26303	Soybean	cytosol, endoplasmic reticulum	21.96	46.07
KRH21710	Soybean	endoplasmic reticulum	48.21	40.06
KRH10640	Soybean	nucleus	48.04	39.91
KRH42039	Soybean	mitochondrion	48.21	39.88
KRH70355	Soybean	cytosol	63.21	39.69
KRH06058	Soybean	mitochondrion	48.75	39.62
KRH49859	Soybean	endoplasmic reticulum, nucleus	47.86	39.59
KRH26302	Soybean	plastid	15.36	31.16

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:100789474	MapMan:19.1.5.1	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40
Gene3D:3.90.640.10	EMBL:ACUP02000776	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G093200	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam
InterPro:IPR029047	InterPro:IPR029048	UniProt:K7K7B7	EnsemblPlants:KRH70484	ProteinID:KRH70484	ProteinID:KRH70484.1
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00329	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF308
SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI000295A9FB	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:8275341..8277604

Molecular Weight (calculated)

61596.5 Da

IEP (calculated)

4.866

GRAVY (calculated)

-0.423

Length

560 amino acids

Sequence
(BLAST)

001: MKLWPFKVIP GPADKPMIVV NYKGEDKQFA AEEISSMVLM KMREIAEAYL GSTVKNAVVT VPAYFNDSQR QATKDAGVIA GLNVMRIINE PTAAAIAYGL
101: DKKATSVGEK NVLIFDLGGG TFDVSLLTIE EGIFEVKATA GDTHLGGEDF DNRMVNHFVQ EFKRKHKKDI SGNPRALRRL RTACERAKRT LSSTAQTTIE
201: IDSLYEGVDF YTTITRARFE ELNMDLFRKC MEPVEKCLRD AKMDKSTVHD VVLVGGSTRI PKVQQLLQDF FNGKELCKSI NPDEAVAYGA AVQAAILSGE
301: GNEKVQDLLL LDVTPLSLGL ETAGGVMTVL IPRNTTIPTK KEQVFSTYSD NQPGVLIQVY EGERARTRDN NLLGKFELSG IPPAPRGVPQ ITVCFDIDAN
401: GILNVSAEDK TTGQKNKITI TNDKGRLSKE EIEKMVQEAE KYKAEDEEHK KKVDAKNALE NYAYNMRNTI KDEKIASKLS GDDKKKIEDA IESAIQWLDG
501: NQLAEADEFE DKMKELESTC NPIIAKMYQG AGAPDMAGGM DEDVPPSGSG GAGPKIEEVD

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.