Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- peroxisome 1
- plasma membrane 1
- mitochondrion 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11260.1 | KRH01631 | AT3G12580.1 | 18065690 |
| AT4G11260.1 | KRH70484 | AT3G12580.1 | 18065690 |
| AT4G11260.1 | KRH04486 | AT4G37460.1 | 21798944 |
| AT4G11260.1 | KRH28408 | AT4G37460.1 | 21798944 |
| AT4G11260.1 | KRH58036 | AT4G37460.1 | 21798944 |
| AT4G11260.1 | KRH77069 | AT4G37460.1 | 21798944 |
| AT4G11260.1 | KRG91395 | AT5G51700.1 | 11847307 |
| AT4G11260.1 | KRH35422 | AT5G51700.1 | 11847307 |
| AT4G11260.1 | KRG91395 | AT5G51700.1 | 18065690 |
| AT4G11260.1 | KRH35422 | AT5G51700.1 | 18065690 |
| AT4G11260.1 | KRH08858 | AT5G52640.1 | 18065690 |
| AT4G11260.1 | KRH38373 | AT5G52640.1 | 18065690 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0624500-01 | Rice | cytosol, nucleus | 41.1 | 25.42 |
| CDY10892 | Canola | endoplasmic reticulum, golgi | 42.47 | 16.4 |
| CDY44118 | Canola | endoplasmic reticulum, plastid, vacuole | 49.32 | 16.36 |
| Bra019498.1-P | Field mustard | cytosol, plastid | 39.73 | 13.12 |
| VIT_12s0035g01560.t01 | Wine grape | cytosol, plasma membrane, vacuole | 39.73 | 11.46 |
| AT4G23570.3 | Thale cress | cytosol | 52.05 | 10.83 |
| Bra019295.1-P | Field mustard | cytosol | 50.68 | 10.79 |
| CDY10946 | Canola | cytosol | 50.68 | 10.76 |
| CDX94203 | Canola | cytosol | 49.32 | 10.47 |
| CDY13243 | Canola | cytosol | 47.95 | 9.83 |
| KRH35228 | Soybean | cytosol | 47.95 | 9.8 |
| Bra000741.1-P | Field mustard | cytosol | 47.95 | 9.78 |
| KRH08815 | Soybean | nucleus | 47.95 | 9.75 |
| VIT_16s0050g01510.t01 | Wine grape | cytosol | 47.95 | 9.7 |
| Bra035239.1-P | Field mustard | cytosol | 46.58 | 9.58 |
| CDX86798 | Canola | cytosol | 46.58 | 9.52 |
| AT4G11260.1 | Thale cress | cytosol | 46.58 | 9.5 |
| KRH38332 | Soybean | cytosol, nucleus | 46.58 | 9.47 |
| CDY05137 | Canola | cytosol | 46.58 | 9.47 |
| CDX90794 | Canola | cytosol | 46.58 | 9.47 |
| PGSC0003DMT400053839 | Potato | cytosol, mitochondrion | 47.95 | 9.46 |
| KRH77588 | Soybean | cytosol | 46.58 | 9.42 |
| Bra013710.1-P | Field mustard | cytosol | 41.1 | 9.32 |
| CDY10894 | Canola | cytosol | 45.21 | 9.3 |
| GSMUA_Achr7P10850_001 | Banana | cytosol | 46.58 | 9.26 |
| Zm00001d044172_P002 | Maize | extracellular | 45.21 | 9.14 |
| EES01101 | Sorghum | cytosol | 45.21 | 9.07 |
| Zm00001d011401_P001 | Maize | extracellular | 43.84 | 8.86 |
| HORVU3Hr1G055920.7 | Barley | cytosol | 45.21 | 8.85 |
| KRH27885 | Soybean | cytosol | 45.21 | 8.82 |
| TraesCS3B01G255300.1 | Wheat | cytosol | 45.21 | 8.75 |
| CDY44117 | Canola | cytosol | 42.47 | 8.68 |
| GSMUA_Achr7P14290_001 | Banana | cytosol | 42.47 | 8.38 |
| GSMUA_Achr4P15560_001 | Banana | cytosol | 41.1 | 8.13 |
| PGSC0003DMT400074364 | Potato | cytosol | 41.1 | 8.09 |
| TraesCS3D01G227500.3 | Wheat | golgi | 45.21 | 7.8 |
| CDY63435 | Canola | cytosol, mitochondrion, nucleus | 21.92 | 5.44 |
| CDY43481 | Canola | cytosol | 2.74 | 2.86 |
| CDY28656 | Canola | cytosol | 2.74 | 2.86 |
| CDY71639 | Canola | cytosol, plastid | 2.74 | 1.68 |
| Solyc06g036410.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02011675 | EnsemblPlants:KRG94038 | EnsemblPlantsGene:GLYMA_19G057000 | InterPro:IPR007699 | InterPro:SGS_dom | PANTHER:PTHR22904 |
| PANTHER:PTHR22904:SF496 | PFAM:PF05002 | PFscan:PS51048 | ProteinID:KRG94038 | ProteinID:KRG94038.1 | UniParc:UPI000294AC6B |
| UniProt:K7MWT0 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:10403335..10404974
Molecular Weight (calculated)
8303.6 Da
IEP (calculated)
5.649
GRAVY (calculated)
-0.732
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MNLAVARGWY TWFPCPNTSF QEKEEKLDGD AALNKFFCEI YQDANEDTRR AMSKSFGLGL TSAGRHGHDV TDR
001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTEAVADAN KAIELDPSLT KAYLRKGTAC MKLEEYRTAK TALEKGASIT
101: PSESKFKKLI DECNFLITEE EKDLVQPVPS TLPSSVTAPP VSELDVTPTA KYRHEYYQKP EEVVVTVFAK GIPKQNVNID FGEQILSVVI EVPGEDAYYL
201: QPRLFGKIIP DKCKYEVLST KIEICLAKAD IITWASLEHG KGPAVLPKPN VSSEVSQRPA YPSSKKVKDW DKLEAEVKKQ EKDEKLEGDA ALNKFFREIY
301: QNADEDMRRA MSKSFVESNG TVLSTNWQEV GTKTIESTPP DGMELKKWEI
101: PSESKFKKLI DECNFLITEE EKDLVQPVPS TLPSSVTAPP VSELDVTPTA KYRHEYYQKP EEVVVTVFAK GIPKQNVNID FGEQILSVVI EVPGEDAYYL
201: QPRLFGKIIP DKCKYEVLST KIEICLAKAD IITWASLEHG KGPAVLPKPN VSSEVSQRPA YPSSKKVKDW DKLEAEVKKQ EKDEKLEGDA ALNKFFREIY
301: QNADEDMRRA MSKSFVESNG TVLSTNWQEV GTKTIESTPP DGMELKKWEI
Arabidopsis Description
SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.