Factsheet for HORVU3Hr1G055920.7

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G072220.4
HORVU2Hr1G063340.8
HORVU2Hr1G097800.8
HORVU3Hr1G086500.3
HORVU4Hr1G059390.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11260.1	HORVU1Hr1G072220.4	AT3G12580.1	18065690
AT4G11260.1	HORVU3Hr1G086500.3	AT3G12580.1	18065690
AT4G11260.1	HORVU4Hr1G059390.1	AT3G12580.1	18065690
AT4G11260.1	HORVU2Hr1G063340.8	AT4G37460.1	21798944
AT4G11260.1	HORVU2Hr1G097800.8	AT5G51700.1	11847307
AT4G11260.1	HORVU2Hr1G097800.8	AT5G51700.1	18065690

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0624500-01	Rice	cytosol, nucleus	27.61	87.29
TraesCS3B01G255300.1	Wheat	cytosol	85.52	84.62
EES01101	Sorghum	cytosol	81.77	83.79
Zm00001d044172_P002	Maize	extracellular	80.7	83.38
TraesCS3D01G227500.3	Wheat	golgi	92.76	81.8
Zm00001d011401_P001	Maize	extracellular	79.09	81.72
GSMUA_Achr7P10850_001	Banana	cytosol	67.56	68.66
VIT_16s0050g01510.t01	Wine grape	cytosol	64.61	66.76
Solyc03g007670.2.1	Tomato	cytosol, extracellular	65.15	65.68
PGSC0003DMT400053839	Potato	cytosol, mitochondrion	65.15	65.68
KRH38332	Soybean	cytosol, nucleus	62.2	64.62
KRH08815	Soybean	nucleus	62.2	64.62
GSMUA_Achr4P15560_001	Banana	cytosol	63.27	63.96
Bra019295.1-P	Field mustard	cytosol	58.45	63.56
CDX94203	Canola	cytosol	58.45	63.37
CDY10946	Canola	cytosol	58.45	63.37
AT4G23570.3	Thale cress	cytosol	59.25	62.96
GSMUA_Achr7P14290_001	Banana	cytosol	62.2	62.7
CDY10892	Canola	endoplasmic reticulum, golgi	31.64	62.43
KRH35228	Soybean	cytosol	59.25	61.9
PGSC0003DMT400074364	Potato	cytosol	61.39	61.73
CDY28656	Canola	cytosol	11.53	61.43
CDY43481	Canola	cytosol	11.53	61.43
Bra013710.1-P	Field mustard	cytosol	52.81	61.18
CDY05137	Canola	cytosol	58.71	61.0
CDY44117	Canola	cytosol	58.18	60.78
CDX90794	Canola	cytosol	58.18	60.45
CDY13243	Canola	cytosol	57.64	60.39
KRH77588	Soybean	cytosol	58.18	60.11
Bra000741.1-P	Field mustard	cytosol	57.64	60.06
Bra035239.1-P	Field mustard	cytosol	57.1	60.0
CDX86798	Canola	cytosol	57.1	59.66
AT4G11260.1	Thale cress	cytosol	57.1	59.5
Solyc06g036420.1.1	Tomato	cytosol	47.19	59.46
CDY10894	Canola	cytosol	56.57	59.44
KRH27885	Soybean	cytosol	57.37	57.22
Solyc06g036410.1.1	Tomato	cytosol	9.92	56.06
CDY44118	Canola	endoplasmic reticulum, plastid, vacuole	32.44	55.0
VIT_02s0025g00450.t01	Wine grape	cytosol	42.9	47.34
Bra019498.1-P	Field mustard	cytosol, plastid	27.88	47.06
KRG94038	Soybean	cytosol, mitochondrion, nucleus	8.85	45.21
CDY63435	Canola	cytosol, mitochondrion, nucleus	32.71	41.5
CDY71639	Canola	cytosol, plastid	11.8	36.97
VIT_12s0035g01560.t01	Wine grape	cytosol, plasma membrane, vacuole	19.57	28.85

Protein Annotations

Gene3D:1.25.40.10	MapMan:19.1.6.3	Gene3D:2.60.40.790	EMBL:AK371948	InterPro:CS_dom	UniProt:F2E724
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU3Hr1G055920	EnsemblPlants:HORVU3Hr1G055920.7	InterPro:HSP20-like_chaperone
InterPro:IPR007052	InterPro:IPR007699	InterPro:IPR008978	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
PFAM:PF04969	PFAM:PF05002	PFAM:PF13181	PFAM:PF13432	PFscan:PS50005	PFscan:PS50293
PFscan:PS51048	PFscan:PS51203	PANTHER:PTHR22904	PANTHER:PTHR22904:SF496	InterPro:SGS_dom	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF49764	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI00000A5B36
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E724]

Coordinates

chrchr3H:-:417329037..417336224

Molecular Weight (calculated)

40998.9 Da

IEP (calculated)

4.660

GRAVY (calculated)

-0.583

Length

373 amino acids

Sequence
(BLAST)

001: MAAAAASDLE SKAKEAFVDD DFELAAELYT QAIEAGPATA ELYADRAQAH IKLGSYTEAV ADANKAIELD PSMHKAYLRK GSACIKLEEY QTAKAALEVG
101: SSYASGDSRF TRLMKECDDR IAEEASQAPV KNAAAAVAPA TSSGATTVVT EAEDQDGENM ENAQPTVEVP SKPKYRHDYY NTPTEVVLTI FAKGVPADSV
201: VVDFGEQMLS VSIELPGEEP YHFQPRLFSK IVPDKCKYTV LSTKVEIRLA KAEPVTWTSL DYTGKPKAPQ KINVPAESAQ RPSYPSSKSK KDWDKLEAEV
301: KKQEKDEKLD GDAALNKFFR EIYSDADEDM RRAMMKSFVE SNGTVLSTNW KDVGKKTVEG SPPDGMELKK WEY

Best Arabidopsis Sequence Match ( AT4G23570.1 )
(BLAST)

001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTEAVADAN KAIELDPSLT KAYLRKGTAC MKLEEYRTAK TALEKGASIT
101: PSESKFKKLI DECNFLITEE EKDLVQPVPS TLPSSVTAPP VSELDVTPTA KYRHEYYQKP EEVVVTVFAK GIPKQNVNID FGEQILSVVI EVPGEDAYYL
201: QPRLFGKIIP DKCKYEVLST KIEICLAKAD IITWASLEHG KGPAVLPKPN VSSEVSQRPA YPSSKKVKDW DKLEAEVKKQ EKDEKLEGDA ALNKFFREIY
301: QNADEDMRRA MSKSFVESNG TVLSTNWQEV GTKTIESTPP DGMELKKWEI

Arabidopsis Description

SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.