Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10946 | Canola | cytosol | 94.48 | 94.48 |
| AT4G23570.3 | Thale cress | cytosol | 84.01 | 82.34 |
| CDY10894 | Canola | cytosol | 81.98 | 79.44 |
| CDY44117 | Canola | cytosol | 81.98 | 78.99 |
| CDY43481 | Canola | cytosol | 15.7 | 77.14 |
| CDY28656 | Canola | cytosol | 15.7 | 77.14 |
| CDY10892 | Canola | endoplasmic reticulum, golgi | 41.86 | 76.19 |
| CDX86798 | Canola | cytosol | 78.78 | 75.91 |
| CDY05137 | Canola | cytosol | 78.78 | 75.49 |
| CDY13243 | Canola | cytosol | 77.91 | 75.28 |
| CDX90794 | Canola | cytosol | 78.2 | 74.93 |
| Os01t0624500-01 | Rice | cytosol, nucleus | 24.71 | 72.03 |
| CDY44118 | Canola | endoplasmic reticulum, plastid, vacuole | 43.9 | 68.64 |
| Solyc03g007670.2.1 | Tomato | cytosol, extracellular | 68.02 | 63.24 |
| KRH38332 | Soybean | cytosol, nucleus | 65.99 | 63.23 |
| KRH08815 | Soybean | nucleus | 65.99 | 63.23 |
| PGSC0003DMT400053839 | Potato | cytosol, mitochondrion | 67.73 | 62.97 |
| VIT_16s0050g01510.t01 | Wine grape | cytosol | 64.53 | 61.5 |
| KRH77588 | Soybean | cytosol | 63.95 | 60.94 |
| GSMUA_Achr7P10850_001 | Banana | cytosol | 64.83 | 60.76 |
| Zm00001d044172_P002 | Maize | extracellular | 63.66 | 60.66 |
| EES01101 | Sorghum | cytosol | 62.79 | 59.34 |
| PGSC0003DMT400074364 | Potato | cytosol | 63.95 | 59.3 |
| Zm00001d011401_P001 | Maize | extracellular | 62.21 | 59.28 |
| KRH35228 | Soybean | cytosol | 60.76 | 58.54 |
| HORVU3Hr1G055920.7 | Barley | cytosol | 63.37 | 58.45 |
| KRH27885 | Soybean | cytosol | 63.37 | 58.29 |
| Solyc06g036410.1.1 | Tomato | cytosol | 11.05 | 57.58 |
| GSMUA_Achr7P14290_001 | Banana | cytosol | 61.63 | 57.3 |
| Solyc06g036420.1.1 | Tomato | cytosol | 49.13 | 57.09 |
| GSMUA_Achr4P15560_001 | Banana | cytosol | 61.05 | 56.91 |
| TraesCS3B01G255300.1 | Wheat | cytosol | 59.01 | 53.85 |
| TraesCS3D01G227500.3 | Wheat | golgi | 63.37 | 51.54 |
| CDY63435 | Canola | cytosol, mitochondrion, nucleus | 43.6 | 51.02 |
| KRG94038 | Soybean | cytosol, mitochondrion, nucleus | 10.47 | 49.32 |
| VIT_02s0025g00450.t01 | Wine grape | cytosol | 45.64 | 46.45 |
| CDY71639 | Canola | cytosol, plastid | 15.99 | 46.22 |
| VIT_12s0035g01560.t01 | Wine grape | cytosol, plasma membrane, vacuole | 20.06 | 27.27 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:19.1.6.3 | Gene3D:2.60.40.790 | EnsemblPlants:CDX94203 | ProteinID:CDX94203 | ProteinID:CDX94203.1 |
| InterPro:CS_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00157139001 | InterPro:HSP20-like_chaperone |
| InterPro:IPR007052 | InterPro:IPR007699 | InterPro:IPR008978 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| PFAM:PF04969 | PFAM:PF05002 | PFAM:PF13181 | PFscan:PS50005 | PFscan:PS50293 | PFscan:PS51048 |
| PFscan:PS51203 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF496 | InterPro:SGS_dom | SMART:SM00028 | SUPFAM:SSF48452 |
| SUPFAM:SSF49764 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0004EED3E0 | SEG:seg |
Description
BnaC07g38370D
Coordinates
chrLK031879:+:1250667..1252776
Molecular Weight (calculated)
38608.1 Da
IEP (calculated)
5.282
GRAVY (calculated)
-0.490
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKELAAQAK EAFVDDDFDV AVDLYSKAID LDPSCADFFA DRAQAYIKLQ NFTAEAVADA KKAIELDPSL TKAYLRKGTA CMKLEEYRTA KTALEKGASI
101: APSESKFKKL IDECNLRIAE EEKDLVQPPV KVDQTPVPAE PAKPKFRHEY YQKPEEVVVT VFAKGIPKQN VNIDFGEQIL SVVIDVPGEE AYHLQPRLFG
201: KIVPKKCIYQ VMSTKIEIRL AKAEIITWTS LEHGKGPAVL PKPDVSTEVS VRPAYPSSKK VKDWDKIEAE VKKQEKDEKL EGDAALNKFF REIYSNADED
301: MRRAMSKSFV ESNGTVLSTD WKEVGAKKIE STPPDGMELK KWEI
101: APSESKFKKL IDECNLRIAE EEKDLVQPPV KVDQTPVPAE PAKPKFRHEY YQKPEEVVVT VFAKGIPKQN VNIDFGEQIL SVVIDVPGEE AYHLQPRLFG
201: KIVPKKCIYQ VMSTKIEIRL AKAEIITWTS LEHGKGPAVL PKPDVSTEVS VRPAYPSSKK VKDWDKIEAE VKKQEKDEKL EGDAALNKFF REIYSNADED
301: MRRAMSKSFV ESNGTVLSTD WKEVGAKKIE STPPDGMELK KWEI
001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTAEAVADA NKAIELDPSL TKAYLRKGTA CMKLEEYRTA KTALEKGASI
101: TPSESKFKKL IDECNFLITE EEKDLVQPVP STLPSSVTAP PVSELDVTPT AKYRHEYYQK PEEVVVTVFA KGIPKQNVNI DFGEQILSVV IEVPGEDAYY
201: LQPRLFGKII PDKCKYEVLS TKIEICLAKA DIITWASLEH GKGPAVLPKP NVSSEVSQRP AYPSSKKVKD WDKLEAEVKK QEKDEKLEGD AALNKFFREI
301: YQNADEDMRR AMSKSFVESN GTVLSTNWQE VGTKTIESTP PDGMELKKWE I
101: TPSESKFKKL IDECNFLITE EEKDLVQPVP STLPSSVTAP PVSELDVTPT AKYRHEYYQK PEEVVVTVFA KGIPKQNVNI DFGEQILSVV IEVPGEDAYY
201: LQPRLFGKII PDKCKYEVLS TKIEICLAKA DIITWASLEH GKGPAVLPKP NVSSEVSQRP AYPSSKKVKD WDKLEAEVKK QEKDEKLEGD AALNKFFREI
301: YQNADEDMRR AMSKSFVESN GTVLSTNWQE VGTKTIESTP PDGMELKKWE I
Arabidopsis Description
SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.