CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019498.1-P	Field mustard	cytosol, plastid	67.23	36.2
CDY10892	Canola	endoplasmic reticulum, golgi	41.18	25.93
CDY44118	Canola	endoplasmic reticulum, plastid, vacuole	38.66	20.91
CDY10946	Canola	cytosol	47.06	16.28
CDX94203	Canola	cytosol	46.22	15.99
CDY10894	Canola	cytosol	45.38	15.21
CDY44117	Canola	cytosol	44.54	14.85
AT4G23570.3	Thale cress	cytosol	43.7	14.81
Solyc06g036420.1.1	Tomato	cytosol	36.13	14.53
CDY13243	Canola	cytosol	42.02	14.04
CDX90794	Canola	cytosol	42.02	13.93
CDY05137	Canola	cytosol	42.02	13.93
CDX86798	Canola	cytosol	41.18	13.73
KRH77588	Soybean	cytosol	38.66	12.74
Zm00001d044172_P002	Maize	extracellular	37.82	12.47
EES01101	Sorghum	cytosol	37.82	12.36
KRH27885	Soybean	cytosol	38.66	12.3
VIT_16s0050g01510.t01	Wine grape	cytosol	36.97	12.19
PGSC0003DMT400053839	Potato	cytosol, mitochondrion	37.82	12.16
PGSC0003DMT400074364	Potato	cytosol	37.82	12.13
Zm00001d011401_P001	Maize	extracellular	36.13	11.91
Solyc03g007670.2.1	Tomato	cytosol, extracellular	36.97	11.89
HORVU3Hr1G055920.7	Barley	cytosol	36.97	11.8
KRH08815	Soybean	nucleus	33.61	11.14
KRH38332	Soybean	cytosol, nucleus	33.61	11.14
TraesCS3B01G255300.1	Wheat	cytosol	35.29	11.14
GSMUA_Achr7P14290_001	Banana	cytosol	34.45	11.08
GSMUA_Achr7P10850_001	Banana	cytosol	33.61	10.9
VIT_02s0025g00450.t01	Wine grape	cytosol	30.25	10.65
GSMUA_Achr4P15560_001	Banana	cytosol	32.77	10.57
TraesCS3D01G227500.3	Wheat	golgi	36.97	10.4
KRH35228	Soybean	cytosol	31.09	10.36
CDY43481	Canola	cytosol	5.04	8.57
CDY28656	Canola	cytosol	5.04	8.57
Os01t0624500-01	Rice	cytosol, nucleus	8.4	8.47
Solyc06g036410.1.1	Tomato	cytosol	4.2	7.58
CDY63435	Canola	cytosol, mitochondrion, nucleus	15.13	6.12
VIT_12s0035g01560.t01	Wine grape	cytosol, plasma membrane, vacuole	10.08	4.74
KRG94038	Soybean	cytosol, mitochondrion, nucleus	1.68	2.74

Protein Annotations

EnsemblPlants:CDY71639	EnsemblPlantsGene:GSBRNA2T00017772001	ProteinID:CDY71639	ProteinID:CDY71639.1	SEG:seg	UniParc:UPI0004EE17CA
UniProt:A0A078JY71	MapMan:35.2	:	:	:	:

Description

BnaAnng38270DBnaAnng38270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JY71]

Coordinates

chrLK046746:+:172..1193

Molecular Weight (calculated)

13339.3 Da

IEP (calculated)

6.512

GRAVY (calculated)

0.188

Length

119 amino acids

Sequence
(BLAST)

001: MANALVFLSD LHTGRSSSSV QVRLLRFWEA WSVRRGGDHM GVDMLLLESQ LSVVIDVPGE EAYHLQPRLI LKIIIEKRLA KAEIITWASL EHGKGPTSLD
101: IWNFGADVSM RLQIICDGI

Best Arabidopsis Sequence Match ( AT4G23570.1 )
(BLAST)

001: MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTEAVADAN KAIELDPSLT KAYLRKGTAC MKLEEYRTAK TALEKGASIT
101: PSESKFKKLI DECNFLITEE EKDLVQPVPS TLPSSVTAPP VSELDVTPTA KYRHEYYQKP EEVVVTVFAK GIPKQNVNID FGEQILSVVI EVPGEDAYYL
201: QPRLFGKIIP DKCKYEVLST KIEICLAKAD IITWASLEHG KGPAVLPKPN VSSEVSQRPA YPSSKKVKDW DKLEAEVKKQ EKDEKLEGDA ALNKFFREIY
301: QNADEDMRRA MSKSFVESNG TVLSTNWQEV GTKTIESTPP DGMELKKWEI

Arabidopsis Description

SGT1Aphosphatase-related [Source:TAIR;Acc:AT4G23570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.