Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44117 | Canola | cytosol | 85.92 | 85.43 |
| CDY10946 | Canola | cytosol | 80.28 | 82.85 |
| CDX94203 | Canola | cytosol | 79.44 | 81.98 |
| CDY10892 | Canola | endoplasmic reticulum, golgi | 43.38 | 81.48 |
| AT4G23570.3 | Thale cress | cytosol | 78.59 | 79.49 |
| CDY28656 | Canola | cytosol | 14.93 | 75.71 |
| CDY43481 | Canola | cytosol | 14.93 | 75.71 |
| CDX90794 | Canola | cytosol | 73.52 | 72.7 |
| CDY44118 | Canola | endoplasmic reticulum, plastid, vacuole | 44.79 | 72.27 |
| CDY13243 | Canola | cytosol | 72.39 | 72.19 |
| CDX86798 | Canola | cytosol | 72.39 | 71.99 |
| CDY05137 | Canola | cytosol | 72.68 | 71.87 |
| Os01t0624500-01 | Rice | cytosol, nucleus | 22.82 | 68.64 |
| Solyc03g007670.2.1 | Tomato | cytosol, extracellular | 64.51 | 61.89 |
| PGSC0003DMT400053839 | Potato | cytosol, mitochondrion | 64.23 | 61.62 |
| KRH08815 | Soybean | nucleus | 60.85 | 60.17 |
| KRH38332 | Soybean | cytosol, nucleus | 60.56 | 59.89 |
| VIT_16s0050g01510.t01 | Wine grape | cytosol | 60.28 | 59.28 |
| KRH77588 | Soybean | cytosol | 59.72 | 58.73 |
| GSMUA_Achr7P10850_001 | Banana | cytosol | 60.28 | 58.31 |
| Zm00001d044172_P002 | Maize | extracellular | 58.87 | 57.89 |
| EES01101 | Sorghum | cytosol | 58.87 | 57.42 |
| Zm00001d011401_P001 | Maize | extracellular | 58.03 | 57.06 |
| PGSC0003DMT400074364 | Potato | cytosol | 59.44 | 56.87 |
| KRH35228 | Soybean | cytosol | 57.18 | 56.86 |
| KRH27885 | Soybean | cytosol | 59.72 | 56.68 |
| HORVU3Hr1G055920.7 | Barley | cytosol | 59.44 | 56.57 |
| GSMUA_Achr7P14290_001 | Banana | cytosol | 57.75 | 55.41 |
| Solyc06g036420.1.1 | Tomato | cytosol | 45.92 | 55.07 |
| GSMUA_Achr4P15560_001 | Banana | cytosol | 56.9 | 54.74 |
| Solyc06g036410.1.1 | Tomato | cytosol | 9.86 | 53.03 |
| TraesCS3B01G255300.1 | Wheat | cytosol | 55.77 | 52.52 |
| TraesCS3D01G227500.3 | Wheat | golgi | 59.44 | 49.88 |
| CDY63435 | Canola | cytosol, mitochondrion, nucleus | 39.44 | 47.62 |
| VIT_02s0025g00450.t01 | Wine grape | cytosol | 44.23 | 46.45 |
| CDY71639 | Canola | cytosol, plastid | 15.21 | 45.38 |
| KRG94038 | Soybean | cytosol, mitochondrion, nucleus | 9.3 | 45.21 |
| VIT_12s0035g01560.t01 | Wine grape | cytosol, plasma membrane, vacuole | 19.15 | 26.88 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:19.1.6.3 | Gene3D:2.60.40.790 | GO:A0A078FD76 | UniProt:A0A078FD76 | EnsemblPlants:CDY10894 |
| ProteinID:CDY10894 | ProteinID:CDY10894.1 | InterPro:CS_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00048796001 | InterPro:HSP20-like_chaperone | InterPro:IPR007052 |
| InterPro:IPR007699 | InterPro:IPR008978 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF04969 |
| PFAM:PF05002 | PFAM:PF13181 | PFscan:PS50005 | PFscan:PS50293 | PFscan:PS51048 | PFscan:PS51203 |
| PANTHER:PTHR22904 | PANTHER:PTHR22904:SF496 | InterPro:SGS_dom | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF49764 |
| TMHMM:TMhelix | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0004EDB411 | SEG:seg |
Description
BnaC01g15090DBnaC01g15090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD76]
Coordinates
chrLK032007:-:704252..706113
Molecular Weight (calculated)
40355.7 Da
IEP (calculated)
5.970
GRAVY (calculated)
-0.378
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKELAAKAK EAFEDDEFDV AVDLYSKAID LDPKCAEFFA DRAQANVKIK KFIAEAVEDA NKAIELDPLL TKAYLRKGTA CMKLEEYQTA KKALEKGASI
101: APCESKFKKL IDECELRISG ISPLNALLFV VIWLIMIMRS ELFNFFAQKK RKFWFNRHDY YQKPEEVVVT IFAKGIPKQN VNIDFGEQIL SVVIDVPGEE
201: EAYHLQPRLF GKIVPEKCRY EVLSTKVEIR LAKAEIITWA SLEHGKVPAV LPKPNVSSEV SVRPAYPSSK KVKDWDKLEA EVKKQEKDEK LEGDAALDKS
301: LREMYSNADE DMRRAMSKSF VESNGTVLST NWKEVGAKTI ESTPPDGMEL KKWEI
101: APCESKFKKL IDECELRISG ISPLNALLFV VIWLIMIMRS ELFNFFAQKK RKFWFNRHDY YQKPEEVVVT IFAKGIPKQN VNIDFGEQIL SVVIDVPGEE
201: EAYHLQPRLF GKIVPEKCRY EVLSTKVEIR LAKAEIITWA SLEHGKVPAV LPKPNVSSEV SVRPAYPSSK KVKDWDKLEA EVKKQEKDEK LEGDAALDKS
301: LREMYSNADE DMRRAMSKSF VESNGTVLST NWKEVGAKTI ESTPPDGMEL KKWEI
001: MAKELAEKAK EAFLDDDFDV AVDLYSKAID LDPNCAAFFA DRAQANIKID NFTEAVVDAN KAIELEPTLA KAYLRKGTAC MKLEEYSTAK AALEKGASVA
101: PNEPKFKKMI DECDLRIAEE EKDLVQPMPP SLPSSSTTPL ATEADAPPVP IPAAPAKPMF RHEFYQKPEE AVVTIFAKKV PKENVTVEFG EQILSVVIDV
201: AGEEAYHLQP RLFGKIIPEK CRFEVLSTKV EIRLAKAEII TWASLEYGKG QSVLPKPNVS SALSQRPVYP SSKPAKDWDK LEAEVKKQEK DEKLDGDAAM
301: NKFFSDIYSS ADEDMRRAMN KSFAESNGTV LSTNWKEVGT KKVESTPPDG MELKKWEY
101: PNEPKFKKMI DECDLRIAEE EKDLVQPMPP SLPSSSTTPL ATEADAPPVP IPAAPAKPMF RHEFYQKPEE AVVTIFAKKV PKENVTVEFG EQILSVVIDV
201: AGEEAYHLQP RLFGKIIPEK CRFEVLSTKV EIRLAKAEII TWASLEYGKG QSVLPKPNVS SALSQRPVYP SSKPAKDWDK LEAEVKKQEK DEKLDGDAAM
301: NKFFSDIYSS ADEDMRRAMN KSFAESNGTV LSTNWKEVGT KKVESTPPDG MELKKWEY
Arabidopsis Description
SGT1BSGT1B [Source:UniProtKB/TrEMBL;Acc:A0A178UX37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.